Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02506 ATGGAACTTCTCTCCCTATTCTCTCACCTTCTTTCAGTAGGGTTTTGTTGTCTCATACTCATTATGCTACTTGGCTTTATTACATCCCTCATCAAATCCTTGAAACATCAACACAGCACCAAAAAGACTAAACTCCCTCCAGGTCCAAAACCATGGCCTATAGTTGGAAATCTTCCTGAATTAATGCTAGCAAACAAGCCAACATTCAGATGGATACAAAACCTTATGAACGATCTCAACACTGAAATAGCATGTATCCGCCTAGGAAATGTCCATGTTATCCCTGTGAGTAGCCCTGAAATCGCACGTGAAATATTGATAAGAAAGGATGTTGTTTTTGCATCAAGACCCTTGAATTGGTCCAGTGAGTATGTCTCGTGTGGATATCTCACCACAGCTCTTGTTCCCTTCGGTGAACAGTGGAAGAAAATGAAGAAACTCATAACCAATGACCTGTTGTCACCTTTGAGGCACCAATGGCTTCATGACAAAAGAGTGGAAGAAGCTAACAACCTTGTGCGTTACGTGTACAACCAATGCAATAGTGGTGGAATTGTGAATGTGAAGATTGCTGCACAGCATTACTCAGGGAACGTTATTAGGAGGTTGGTTTTCAATACAAGGTACTTTGGAGAAGGTTGTGAAGATGGGGGGCCTGGATTTGAGGAAGTAGAGCACATGCAAGCACTTTTCAATGTGTTGAAGTACCTCTTTGCCTTTTCTGTTTCGGATTACATGCCATGTTTGAGGGGATTTGACTTGGATGGCCATGAGAAACACATGAAGGAGGCTGCTGAGATTGTGAGGAAATATCATGATCCCATCATTGAGGATAGAATTGAGCAATGGAAGAATGGGAAAAGGATAAAGGAAGAAGATTTGCTTGATGTTCTCATCTCACTCAAAGATGCGGACAACAATGCACTCTTGACGGCTGAGGAAATTAAATCTCAACTTATGGAAATAATGTTGGCAACCGTGGATAATCCATCAAATGCAATTGAATGGGGACTTGCTGAAATGATAAATCAACCTGCGCTACTTCAAAAGGCCACCGAAGAATTGGACAATGTGGTTGGTAAAGAGAGACAAGTGCAAGAATCAGATTTTCCGAAGCTCAACTATGTGAAGGCATGTGCAAGAGAAGCTTTTCGCCTTCACCCCATTGTGGATTTTATCATTCCACATGTCTCAGTAGCTGACACAATTGTTGCTAATTACTTCATCCCAAAGGGTAGCCAAGTGTTGCTAAGGAGACAAGGAGTTGGCCAAAACCCAAGAGTTTGGAAAGAACCACTCAAGTTTAAACCTGAACGTCACCTTAAGAGTGATGGGTCTAATTTGGTCTTAACAGAGCCAAGCTTGAAATTAATAACATTTAGCACTGGGAGACGTGGCTGTCCAGGGCTCATGCTTGGTAGTGACATGACTATTATGTTATTCGCTAGGTTGCTGCATGGCTTCACTTGGAATGTGCCACCCAATCAATCTACCATTGACCTCTCTGAATCTGAAGGAGATACCACCAAAGCTAAGCCACTTGTGGCATTTGCAAAGCCAAGGTTACCAACAGAGGCTTATCGTATATAA 1590 0.4226 MELLSLFSHLLSVGFCCLILIMLLGFITSLIKSLKHQHSTKKTKLPPGPKPWPIVGNLPELMLANKPTFRWIQNLMNDLNTEIACIRLGNVHVIPVSSPEIAREILIRKDVVFASRPLNWSSEYVSCGYLTTALVPFGEQWKKMKKLITNDLLSPLRHQWLHDKRVEEANNLVRYVYNQCNSGGIVNVKIAAQHYSGNVIRRLVFNTRYFGEGCEDGGPGFEEVEHMQALFNVLKYLFAFSVSDYMPCLRGFDLDGHEKHMKEAAEIVRKYHDPIIEDRIEQWKNGKRIKEEDLLDVLISLKDADNNALLTAEEIKSQLMEIMLATVDNPSNAIEWGLAEMINQPALLQKATEELDNVVGKERQVQESDFPKLNYVKACAREAFRLHPIVDFIIPHVSVADTIVANYFIPKGSQVLLRRQGVGQNPRVWKEPLKFKPERHLKSDGSNLVLTEPSLKLITFSTGRRGCPGLMLGSDMTIMLFARLLHGFTWNVPPNQSTIDLSESEGDTTKAKPLVAFAKPRLPTEAYRI. 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02506 529 SUPERFAMILY Cytochrome P450 46 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02506 529 Pfam Cytochrome P450 46 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02506 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Seca6g02506 529 FunFam Cytochrome P450 9 38 525 - -
Seca6g02506 529 Gene3D Cytochrome P450 30 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02506 529 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02506 529 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02506 529 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02506 529 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02506 529 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02506 529 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02506 529 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02506 529 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 18 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02506 Seca-Chr6 88134047 88137074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02506 9 527 Cytochrome P450 AT4G39950 53.065 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02506 - K13027 gmx:100809902 706.442