Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02501 ATGGCAGAGGACAATGTAGTTCTGTTGGATTTCTGGCCAAGCTCTTATGGAATGAGGGTGAAAATAGCTTTAGCTGAGAAGGGGGTCTCATACGAGTGCAGGCAAGAAAACTTTGAAGCTAAAAGTTCTCTACTCTTAGAGATGAACCCGGTTCACAAAATGATCCCAGTTTTGATTCATAATGGAAAACCCATTTGTGAATCACTCAACATTGTTGAGTATATTGATGAGACTTGGAACCACAAACCTTCTTTGCTGCCTTCTGACCCTTACAAACGATCCCAAGCCAGGTTTTGGGGCGATTACATTAACAAAAATGTGTACAGCATTGGGAAGAAGGTATGGACAGGAAAGGGTGAAGAACAAGAAGAGGGCAAGAAGCAATTCATAGAATGCTTGAAGATTCTGGAAGAAGAGCTTGGAGACAAACCATATTTTGGTGGTGAGGACTTTGGCTATGTGGATGTGGCTCTTGTTCCCTTCACTAGCTGGTTTTACACATACGAGACCTGTGGGAAAATAAGCATAGGGAAAGAGTGTCCCAATCTTGTGGCTTGGGCCAAGAGGTGCATGGAAAAAGAGAGTGTGGCCAAGTCACTCCCTCACCCTCACAAGATATATGGTTTTGCACTGCAATATAAACAGAGACATGGACTTGAATAG 663 0.4314 MAEDNVVLLDFWPSSYGMRVKIALAEKGVSYECRQENFEAKSSLLLEMNPVHKMIPVLIHNGKPICESLNIVEYIDETWNHKPSLLPSDPYKRSQARFWGDYINKNVYSIGKKVWTGKGEEQEEGKKQFIECLKILEEELGDKPYFGGEDFGYVDVALVPFTSWFYTYETCGKISIGKECPNLVAWAKRCMEKESVAKSLPHPHKIYGFALQYKQRHGLE. 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02501 220 Pfam Glutathione S-transferase, N-terminal domain 8 77 IPR004045 -
Seca6g02501 220 FunFam Tau class glutathione S-transferase 1 88 - -
Seca6g02501 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 207 IPR045073 -
Seca6g02501 220 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Seca6g02501 220 CDD GST_C_Tau 90 213 IPR045074 GO:0004364|GO:0006749
Seca6g02501 220 SUPERFAMILY GST C-terminal domain-like 77 217 IPR036282 -
Seca6g02501 220 Gene3D Glutaredoxin 1 88 - -
Seca6g02501 220 SFLD Glutathione Transferase (cytosolic) 2 217 IPR040079 -
Seca6g02501 220 Pfam Glutathione S-transferase, C-terminal domain 123 189 - -
Seca6g02501 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Seca6g02501 220 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Seca6g02501 220 Gene3D - 89 220 - -
Seca6g02501 220 CDD GST_N_Tau 6 79 - -
Seca6g02501 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 209 IPR010987 -
Seca6g02501 220 FunFam Glutathione S-transferase U20 89 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02501 Seca-Chr6 88057522 88059042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02501 7 217 Glutathione S-transferase Gene Family AT1G78370 60.664 4.50e-100 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02501 K00799 - gmx:100527221 403.29