Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02472 ATGTCAGCCACTGCTAGCTTGGGCTATGGAGGACCAACATGCCTCAATGTTCAGCAGGCAAAGAAGCAGCAACCAACAAGGAACAGCTTCATAGCAAAACAGCATAACACTGTGGGGAAGATGATGATGATGGGTTTGAGAGGAAGACATGGTAAAACAAACAAAAGGGTAGGAGTAGTGAGGTGTAGTGGAATTGGACTAGGAGACTTCATAGGAGGAGACTTGGTGAAATTTGATCTTGGACGTTGGCTTTCAGATGTTGAAGAGCACAAAGCACTTGCAATATACACTCCTCATGAGGGAGGCTATGAAGGGCGTTACTTATCACGTCTCAAACGTCAGGGATACTATTTTCTAGACCTTACAGCTCGTGGTCTTGGTGATCCTGAAACCACACTCACCAAGATTCACCCTGTTTGCCCTGCCCATATTGGGAAGCAGCCAATAGCAAGGTGGTATTTCCCACCAGAAGTTGATTATAGGCTGGAAGCATTGCCACCAAATGCCAAAGGACTGGTGGTTCTATCTAAGGCAGAACTGCAATTCCTTGCTCTGCTGCCTACACTTAGGCCTAATAAACAGAACAGAAAGTGTTCTATGGCCATGCAGCTCCAATTTGATTCCCAGTTTTTGATATCCATCGGGTTTCTTGGTTTTGTTGGGCTGTTGGTTCGTTTGTATAGTGCTTTGGTGTGGAAGCCAAATAGGCTTCGGTGTAAGCTAAGGAAACAAGGTATCAAAGGTCCACCTTCAACTATACTGCTTGGAAATATCAGGGACATAAAGAAAGCTCAGCCTACCACTGCAAATTCTCCTTCTTTAGAACCCCCTGCTTCTCACAACTGTGCTTCTGTTCTCCTTCCCTTATTTGAGAAATGGAGGGAGCAATATGGTCAAGTGTTCATGTTTTCTCTTGGAAACATACAAATATTGTCTGTGAGCCAACCTGACATAGTGAAAGATATCACCACATGCACCTCCTTGGACTTGGGGAAGCCTTCATATCAGCAAAGACAACTAGGGCCTTTGTTGGGTAGGGGCGTTTTGACTTCAAATGGGACTATATGGGCCCATCAAAGAAAGATCCTAGCTCCAGAACTATACATGGAGAAGGTTAAGGGAATGATGAAAATAGTTAGTGAGTCCTCTATATCACTACTAAACTTATGGAGTAGTAAAATAGAGGCAGAAGGTGGAGTTGCAGATATAAAAATTGATGAGTACATGAGAACTTTCTCTGGGAATGTTATCTCAAGAGCATGTTTTGGAAGCAATTATTCCAAAGGGGAAGAAATTTTCTTGAAACTCAGAGCCCTCCAAGAGGTCATATGCTGGAAAAATATGTCCAAAGGGGTCCCTGGTATGAGATACCTTCCAACAAAGACCAATAGAAAAGCATGGGCATTAGAAAAGGAGGTGACAAGTTTGATACTCCAAGGGGTGAAGGAAAGAAAGGAAAGTAATTTTGGAAAGGACCTTTTGCAAATGGTTCTTGAGGGTGCTAAAAAAAGCAACCTCACTCAAGAAGCCACTGATTGTTTTATTGTTGATAACTGCAAGAACATATACTTGGCAGGTTATGAGACAACTGCAATTGCTGCTACATGGTGCCTTATGTTGTTGGCCTCAAATAAAAGTTGGCAAGATCGTGTTCGAGCTGAGGTACTAGAAATTTGCCAGGGAAGGATCCCAGATTATGATATGATTTGTAAGATGAAGCAGCTAACAATGGTTATTCATGAGTCATTGCGCCTCTATCCTCCTGTAGCTGTGATGTCAAGACAAGCCTTCAAGGACATGAAATTTGGCAATATTGATGTTCCTAAGGGCCTTAGCCTTTGGATAATGGTAATAACTTTGCATACAGATCCAGATATCTGGGGAGCTGATGCCTACAAATTCAACCCAGAAAGATTTGCCAATGGAACCATAGGTGCTTGTAAGCTTCCACATGTGTATATGCCCTTTGGTCTTGGTCCAAGAGTGTGTCTTGGACAGAACTTGGCTATGGTTGAACTTAAGATGATGATAGCTCTCATCTTGTCTAAATTCTCTTTCTCCCTTTCTCCTAGATACATCCATTCACCTGCTCTTAGGTTGCTTATGGAGCCTGCCCATGGAGTCCATCTCTTAGTAAGAAAGCTATAA 2148 0.4278 MSATASLGYGGPTCLNVQQAKKQQPTRNSFIAKQHNTVGKMMMMGLRGRHGKTNKRVGVVRCSGIGLGDFIGGDLVKFDLGRWLSDVEEHKALAIYTPHEGGYEGRYLSRLKRQGYYFLDLTARGLGDPETTLTKIHPVCPAHIGKQPIARWYFPPEVDYRLEALPPNAKGLVVLSKAELQFLALLPTLRPNKQNRKCSMAMQLQFDSQFLISIGFLGFVGLLVRLYSALVWKPNRLRCKLRKQGIKGPPSTILLGNIRDIKKAQPTTANSPSLEPPASHNCASVLLPLFEKWREQYGQVFMFSLGNIQILSVSQPDIVKDITTCTSLDLGKPSYQQRQLGPLLGRGVLTSNGTIWAHQRKILAPELYMEKVKGMMKIVSESSISLLNLWSSKIEAEGGVADIKIDEYMRTFSGNVISRACFGSNYSKGEEIFLKLRALQEVICWKNMSKGVPGMRYLPTKTNRKAWALEKEVTSLILQGVKERKESNFGKDLLQMVLEGAKKSNLTQEATDCFIVDNCKNIYLAGYETTAIAATWCLMLLASNKSWQDRVRAEVLEICQGRIPDYDMICKMKQLTMVIHESLRLYPPVAVMSRQAFKDMKFGNIDVPKGLSLWIMVITLHTDPDIWGADAYKFNPERFANGTIGACKLPHVYMPFGLGPRVCLGQNLAMVELKMMIALILSKFSFSLSPRYIHSPALRLLMEPAHGVHLLVRKL. 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02472 715 Pfam NADH-quinone oxidoreductase cyanobacterial subunit N 82 192 IPR020874 GO:0016020|GO:0016655
Seca6g02472 715 PRINTS P450 superfamily signature 525 542 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02472 715 PRINTS P450 superfamily signature 663 674 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02472 715 PRINTS P450 superfamily signature 577 588 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02472 715 PRINTS P450 superfamily signature 654 663 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02472 715 SUPERFAMILY Cytochrome P450 285 713 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02472 715 PANTHER CYTOCHROME P450 FAMILY MEMBER 224 707 - -
Seca6g02472 715 Pfam Cytochrome P450 290 690 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02472 715 Gene3D Cytochrome P450 234 715 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02472 715 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 656 665 IPR017972 GO:0005506|GO:0016705
Seca6g02472 715 PRINTS E-class P450 group I signature 534 560 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02472 715 PRINTS E-class P450 group I signature 412 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02472 715 PRINTS E-class P450 group I signature 663 686 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02472 715 PRINTS E-class P450 group I signature 514 531 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02472 715 PRINTS E-class P450 group I signature 653 663 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02472 715 PRINTS E-class P450 group I signature 294 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02472 Seca-Chr6 87400818 87411240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02472 318 712 Cytochrome P450 AT5G24900 45.209 2.50e-124 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02472 K24544 - gmx:100785420 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02472 6 87400818 87411240 Seca6g02472 6 87400818 87411240 ECH