Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02463 ATGGTTAAGTGGTTGAAGATTGGAGTCATTGGAAGTGGTAGTCATGGCACCGTTTACAAAGCTATCACTGCTGCACCAGGAAAAAATTCTCTAAAGCCAATAGCTATAAAGAGTGCAACGCTTAGCAAGTCTTATGAGTTGTATAGAGAAGCGGATATTCTAAACTCTTTCATTTGTGTTCCAGAAATTGTTCAATCCCAGGGCAATGATGTCACCATGGAGGATGGTGAGTGGGTCTACAATCTCTACTTGGAGTATGCCCCTTTTGGCACTCTTGGTGATATGATCAAGAAAGGGCGTTTCTTGGAGAACAGGACAACAAAAATCTACATGAACATGCTCCTAAAAGGCCTTTCTCGCATCCACCAAAGAGGATTTGTGCATTGTGATCTCAAACCTGATAACATCCTTGTATTCCCACCACATTCGTATCAAGATAACAGATATTATCAACTAAAAATTGCTGACTTTGGATTGGCTAAGACTTCTGAGGAGAAGGTGAATCAAGAAGATTGGAAGTGGAGATTTAGAGGGACTCCTTTGTTCATGTCACCGGAATCACTTTCTTGTGGCCAAATTGAAGCACCTTTGGACATATGGTCTTTTGGGTGCATAGTTCTTGAGATGCTCACTGGATACCCTGCATGGAGGAATGAGATGAAAACTGAAGAGGACATAATGTTTAAGGTTGGGATTATGAAAGAAACACCAAAGATTCCACTTGAACTGAGTAATGAATGCATTGACTTTTTAAACAAATGTTTTGCACAAGACCCAAGTCAAAGATGGACTGCTGACAAGCTTATGTATCATCCTTATATTCTTTTGGATTTGGAGTTGCTTGTTTAG 849 0.4016 MVKWLKIGVIGSGSHGTVYKAITAAPGKNSLKPIAIKSATLSKSYELYREADILNSFICVPEIVQSQGNDVTMEDGEWVYNLYLEYAPFGTLGDMIKKGRFLENRTTKIYMNMLLKGLSRIHQRGFVHCDLKPDNILVFPPHSYQDNRYYQLKIADFGLAKTSEEKVNQEDWKWRFRGTPLFMSPESLSCGQIEAPLDIWSFGCIVLEMLTGYPAWRNEMKTEEDIMFKVGIMKETPKIPLELSNECIDFLNKCFAQDPSQRWTADKLMYHPYILLDLELLV. 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02463 282 SUPERFAMILY Protein kinase-like (PK-like) 4 275 IPR011009 -
Seca6g02463 282 ProSiteProfiles Protein kinase domain profile. 4 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g02463 282 ProSitePatterns Protein kinases ATP-binding region signature. 10 37 IPR017441 GO:0005524
Seca6g02463 282 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Seca6g02463 282 Gene3D Phosphorylase Kinase; domain 1 3 73 - -
Seca6g02463 282 Pfam Protein kinase domain 7 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g02463 282 Gene3D Transferase(Phosphotransferase) domain 1 75 279 - -
Seca6g02463 282 SMART serkin_6 4 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g02463 282 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02463 Seca-Chr6 87339206 87340054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02463 2 279 MAP Kinase Kinase Kinase AT4G36950 39.576 1.19e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Seca6g02463 Pkinase 2e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02463 - - gmx:102667952 270.781