Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02449 ATGTCAAACCGAGTTTACATGAAAAAGGGGTTGCTAACAGTAATGGGCACCCACATTGTGCACTTTCTAAGCAAACACAAACAACACTCACTTCGTGTTTCCATCTCCGTTCGATCAAAAACGACGTCTTCCCAGTATGTAGCATCGAGAGCTAGAGACCCCACGTTTGAGAAGCTTATGGACAAGTACAAGAGCCTTCTCAAAGTTATTGCCATTCAAGACCTTATCCTTGCAAACCCCAAGAACCCATCAGTCTCCATTGATTTCCTCTCCAGGCTCTCCCAGAAGCTCCACCTCAACCGTGGCGCCACTGCCTTCCTCCGCAAGTTTCCTCGCATCTTCCACATTTACTATGAGCCCTCCAAGTTGCAGCCCTATTGCAGGTTAACTGATGCTGCTCTTGATGTTTCGCGGCAGGAAGCAGAGGCCATTAATGCTTCTTTGCCTGTTGTTGTTGATAGACTTGTTCGGATACTGTCCATGTCTGCATCCAAAATGGTGCCTCTTCGAGCTATTTTCAAGGTTTGGAGGGAGCTTGGTTTGCCCGATGATTTTGAGGACTCGGTTATAGCTGCTAATTCTAGTGTTTTTCAGCTGTGTGATGGGCGTGAACTGAATACTCATATGTTGAAGCTGGTTGGTGGTCTTCCCAACAATGGTTTTAGAGCGGCTGTTGCGGATTGGAGGGTTGTTGAGTGCTGTAAGGAGGACTGCAGTGTTGATAGGATGGAAATGCGGTTCAGTTTCAAACATGGGTATCCTCCAGGGATGAGGTTGAGCAAGAATTTCAAGGCCAAGGTGAAGGAATGGCAGAGTTTGCCATATGTGGGGCCTTATGAGATGATGGATGAGAAGAAGAAAAAGTCTAAGGCTGGAGTGATGGCTATGGAGAAACGAGCAGTGTCAATTGTTCATGAGTTCCTGAGTTTGACAGTGGAGAAGATGGTGGAAGTTGAGAAGATCAGCCATTTTAGAAAATGGTTTGGTATTGATTTAAATATAAGGGATCTGTTCCTGGATCATCCAGGGATCTTCTATTTGTCAACTAAGGGAAAACGGCATACAGTTTTCCTGAGGGAAGCTTATGAAAGGGGATGTTTGATCCAGCCAAATCCTGTCTATGATGCAAGGAGAAGGCTACTTGATCTTGTTCTTTTAGGACGTCGGGGTCTGCCTGCTGTTAATTCCAAGTTGGAGGATAGCAGCAGTAGCAATGAGGATGAACAAGAGAATAACCAGCAAAGACGTGACTTATCATCATCTTGA 1266 0.455 MSNRVYMKKGLLTVMGTHIVHFLSKHKQHSLRVSISVRSKTTSSQYVASRARDPTFEKLMDKYKSLLKVIAIQDLILANPKNPSVSIDFLSRLSQKLHLNRGATAFLRKFPRIFHIYYEPSKLQPYCRLTDAALDVSRQEAEAINASLPVVVDRLVRILSMSASKMVPLRAIFKVWRELGLPDDFEDSVIAANSSVFQLCDGRELNTHMLKLVGGLPNNGFRAAVADWRVVECCKEDCSVDRMEMRFSFKHGYPPGMRLSKNFKAKVKEWQSLPYVGPYEMMDEKKKKSKAGVMAMEKRAVSIVHEFLSLTVEKMVEVEKISHFRKWFGIDLNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIQPNPVYDARRRLLDLVLLGRRGLPAVNSKLEDSSSSNEDEQENNQQRRDLSSS. 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02449 421 MobiDBLite consensus disorder prediction 395 421 - -
Seca6g02449 421 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 36 411 IPR045040 GO:0003723
Seca6g02449 421 Pfam Plant organelle RNA recognition domain 52 388 IPR021099 GO:0003723
Seca6g02449 421 MobiDBLite consensus disorder prediction 401 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02449 Seca-Chr6 87196564 87199022 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02449 - - mtr:25489191 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02449 6 87196564 87199022 Seca6g02449 6 87196564 87199022 ECH
Seca6g02449 6 87196564 87199022 Seca2g05281 2 139328226 139332159 PCT