Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02432 ATGGCACTGTGTACCAAGCTATCACTTCTAAGCCAGAAAAAGAAATCGTTCGATCCCATGGCAGTGATGTCACCGTGGAGGATGGTGAATGGGGAGTATGCTCCTTTTGGCATTCTCATTGACATGATCAAGACAGGGTGCTTCTTGGAGAGCAAGACAACAAAATTCTACGTGAACTTGCTCCCAAGAGGCCTTTCTTGCATTCATCAAAGAGGATTTGTGCATTGTGATCTCAAACATGACAATATCCTTGTATACCCACCACGTTCAAATTAA 276 0.4348 MALCTKLSLLSQKKKSFDPMAVMSPWRMVNGEYAPFGILIDMIKTGCFLESKTTKFYVNLLPRGLSCIHQRGFVHCDLKHDNILVYPPRSN. 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02432 91 ProSitePatterns Serine/Threonine protein kinases active-site signature. 73 85 IPR008271 GO:0004672|GO:0006468
Seca6g02432 91 Pfam Protein kinase domain 30 85 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g02432 91 Gene3D Transferase(Phosphotransferase) domain 1 18 91 - -
Seca6g02432 91 SUPERFAMILY Protein kinase-like (PK-like) 30 86 IPR011009 -
Seca6g02432 91 ProSiteProfiles Protein kinase domain profile. 1 91 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02432 Seca-Chr6 87070832 87071207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02432 32 85 MAP Kinase Kinase Kinase AT2G32510 39.286 1.65e-07 45.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Seca6g02432 Pkinase 5.6e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02432 - - twl:119991585 65.0846