Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca6g02422 | ATGTTGTGGTCATGGAGAAACTTTCATGGTGCACTAGCAGATCCTCAAATCCGTTTACTCAACAAAGGTTGCAGCCAATACAACGCCACCGACTTGTATGAGAGCAATGGCTTTTTCGACCAAACCACTTTACCCGGCAACAGTATGATTTGTGGAAATCAAACTGCAAATGGAGCCACTGCTTTTAGTACAAGTGCACAACAAGTGCTAATGGATCTACAAACAGCAACACCCAAGATTCCTGGTTTCTTTGCAGCTACTAAGACACCAGTGGCTAGTGGTGCAATCTATGCCATTGCACAATGTGCTGAAACTGTCACAGAAAGTGGTTGTTTGGATTGTTTAACAGTTGGATACAACAACATAGAGAGTTGTTTTCCTAATACAGATGGTAGAGCATTTGATGCAGGATGTTTTATGAGTTCAAGCAAGAAAGGGGCCATTATTGGTGGTGTTGTTGGAGGTGTAGGTCTTGTTTTGATCATCCTTGCACTGTTTGTATGGCTTAGGCGATACAAGAAACCCAAGAGGCTTCCTAGAGGTGACTTATTGGGAGCAACTGAATTGAAAGGTCCAGTTATCTACAGCTATAAAGATTTGAAGTCTGCAACAAAAAGTTTTAGTGATGAAAATAAACTAGGAGAAGGAGGTTTTGGAGATGTATATAAGGGCACTCTGAAAAATGGTAAAGTAGTTGCAGTCAAGAAATTAATTTTACGCCAATCCAGCAAGATGGATGAACAATTTGAAAGTGAAGTCAAGCTTATAAGTAATGTTCATCATAGGAATCTAGTGAGACTCCTTGGATGTTGCAGTAAAGGCCAAGAGAGAATCCTTGTCTATGAATACATGGCAAACAGTAGCTTGGACAGATTCTTATTTGGTGAAAAGAAAGGTTCTCTCAACTGGAAACAACGGTATGATATAATTTTAGGCACAGCAAGGGGTCTAGCCTATCTACATGAGGATTTCCATGTTTGCATCATACACAGAGATATAAAGACTAACAATATCCTCTTAGATGATGATCTTCAGCCTAGAATTGCTGACTTTGGGTTGGCAAGACTTTTACCAGAGGACCAATCTCATCTTAGCACAAAATTTGCAGGAACATTGGGATACACAGCACCTGAGTATGCAATCCATGGTCAGCTATCAGAGAAAGCTGATACCTACAGCTTTGGTGTTGTAGTCCTAGAAATCATAAGTGGCCAAAAGAGTAGTGAATTGAGGGCTGATGCTGATGGTGAATTCCTCCTTCAAAGGGCATGGAAACTGTATGAGGGAGGTATGCACTTGGAGTTGGTTGACAAGACATTGAACCCTGATGACTATGATGCAGAAGAAGTGAAGAAAGTTATAGAGATTGCTTTATTGTGTACTCAAGCATCAGCAGCTGCAAGGCCAACAATGTCTGAAATAGTAGTACTACTCAAAAGCAAGAACTTATTGGAGCATATGAAGCCATCCATGCCTGTCTTTGTTGAATCTAATGTTAGGCCTCGGACAGACACTTCTACCTCAACTGGTTCTTCTACATCTACTGCTACTGCTTCTACTTCTATACTATCAGCTCGATGA | 1581 | 0.408 | MLWSWRNFHGALADPQIRLLNKGCSQYNATDLYESNGFFDQTTLPGNSMICGNQTANGATAFSTSAQQVLMDLQTATPKIPGFFAATKTPVASGAIYAIAQCAETVTESGCLDCLTVGYNNIESCFPNTDGRAFDAGCFMSSSKKGAIIGGVVGGVGLVLIILALFVWLRRYKKPKRLPRGDLLGATELKGPVIYSYKDLKSATKSFSDENKLGEGGFGDVYKGTLKNGKVVAVKKLILRQSSKMDEQFESEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMANSSLDRFLFGEKKGSLNWKQRYDIILGTARGLAYLHEDFHVCIIHRDIKTNNILLDDDLQPRIADFGLARLLPEDQSHLSTKFAGTLGYTAPEYAIHGQLSEKADTYSFGVVVLEIISGQKSSELRADADGEFLLQRAWKLYEGGMHLELVDKTLNPDDYDAEEVKKVIEIALLCTQASAAARPTMSEIVVLLKSKNLLEHMKPSMPVFVESNVRPRTDTSTSTGSSTSTATASTSILSAR. | 527 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca6g02422 | 526 | CDD | STKc_IRAK | 213 | 479 | - | - | |
Seca6g02422 | 526 | Gene3D | - | 47 | 145 | IPR038408 | - | |
Seca6g02422 | 526 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 328 | 340 | IPR008271 | GO:0004672|GO:0006468 | |
Seca6g02422 | 526 | Gene3D | Transferase(Phosphotransferase) domain 1 | 284 | 491 | - | - | |
Seca6g02422 | 526 | SMART | serkin_6 | 207 | 484 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca6g02422 | 526 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 23 | 515 | - | - | |
Seca6g02422 | 526 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 46 | 146 | - | - | |
Seca6g02422 | 526 | Pfam | Protein tyrosine and serine/threonine kinase | 210 | 477 | IPR001245 | GO:0004672|GO:0006468 | |
Seca6g02422 | 526 | ProSitePatterns | Protein kinases ATP-binding region signature. | 213 | 236 | IPR017441 | GO:0005524 | |
Seca6g02422 | 526 | Gene3D | Phosphorylase Kinase; domain 1 | 185 | 283 | - | - | |
Seca6g02422 | 526 | Pfam | Salt stress response/antifungal | 51 | 143 | IPR002902 | - | |
Seca6g02422 | 526 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 284 | 486 | - | - | |
Seca6g02422 | 526 | SUPERFAMILY | Protein kinase-like (PK-like) | 191 | 511 | IPR011009 | - | |
Seca6g02422 | 526 | MobiDBLite | consensus disorder prediction | 498 | 526 | - | - | |
Seca6g02422 | 526 | MobiDBLite | consensus disorder prediction | 499 | 526 | - | - | |
Seca6g02422 | 526 | ProSiteProfiles | Gnk2-homologous domain profile. | 44 | 147 | IPR002902 | - | |
Seca6g02422 | 526 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 172 | 283 | - | - | |
Seca6g02422 | 526 | ProSiteProfiles | Protein kinase domain profile. | 207 | 494 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca6g02422 | Seca-Chr6 | 86864390 | 86870426 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca6g02422 | 34 | 526 | Receptor kinase-like Gene Family | AT1G70520 | 38.432 | 2.73e-106 | 330 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Seca6g02422 | Pkinase | 2.8e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca6g02422 | - | - | gmx:100813585 | 785.023 |