Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02419 ATGAGACAATTTGTATGTAACAAGGAGGGAGAGAGGAGTGGAAAACACCTTAATAGGACTGATAGAAAGAGGGAGGCAAAGGCCACTACACAAACAAAATGTAATGCAAGGCTCCGAATTCATTTAGATTATAAGAGTAGGAAGTGGATTGTTGGTTCTTTTGAGCCATCGCACAACCATGAATTGACTCCTGCTAGTATGGTTCATTTGCTGCCAGCTTATCGTGGGTTGAGTGTAGCTGATAAGGCACGGGTTGACAGTCTACATCATTACGGTGTTAGGACTTGCCATATTATGGGGCTTATAATGGGTTAG 315 0.4254 MRQFVCNKEGERSGKHLNRTDRKREAKATTQTKCNARLRIHLDYKSRKWIVGSFEPSHNHELTPASMVHLLPAYRGLSVADKARVDSLHHYGVRTCHIMGLIMG. 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02419 104 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 101 - -
Seca6g02419 104 MobiDBLite consensus disorder prediction 1 31 - -
Seca6g02419 104 Pfam FAR1 DNA-binding domain 2 64 IPR004330 -
Seca6g02419 104 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02419 Seca-Chr6 86827803 86828117 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca6g02419 FAR1 9e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02419 - - ccaj:109792835 136.732