Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca6g02395 | ATGACAATGGGAGGAGGAGAACAGTCCTTGGCACCACTCCCATTTGACAGAACTCTTGAACAGGCAATTGTATCTATAAAGAAAGGTGCATATTTACTAAAGTGTGGTCGCAGAGGAAAGCCAAAGCTTTGCCCTTTCAGACTTTCTCCGGATGAGAGAAATTTGATTTGGTACTCAGGCCAGCAGGAAAAACATTTGCGATTGAGTGCAGTTACAAAAATTATTCAAGGGCAGGGAAATATAAGGTCCCAGAGGCAAAATGAACCTGAAAAGGAGTGTCATTCATTTTCACTAATCTATGCTAATGGAGAACGATCTCTTGATCTGATATGCAAGGACAAAGCACAGGCTGCTTCTTGGTTTGTTGGCTTGAAAGCTGTGATTTCAAGGTGCCAGCATCCTAGAACTTTTAGTAGTTTAAGAAGTTGTAAAGGGGTGCAAAGTTGTGTCAGTAGTCCAGCTGGAATATTAAGAAGAAAGAAAAATCTTGGCCTTCTGGATGATAACTCTCAATTTACTCAGGTACATAGCGTATGTGCAAGTCCTACTTTGTCACTTTCAGAAAGGTGCTTTTCTGATGGCTTGTCATATACATCTGATAACATTTATTCATCTGCATCTTTCCTCTCCAGCACTCATGGCATAACAGATTCAGTCCCAAGTTCTCCATATATTGATTCAGATATTCATAGAAAGATTGAGTCAACACGTGTTGACAAGGAACACAAGAATTTGTCCTACAGGTCTCTGATGCCTCCTACCTCCCCACATGTAGGAAATAACAATGTATTAAAAGATGTAATGATATGGGGTGGAGGGATTGGATGTCTTGTAGGGATTGTAAATGAAAGGTTTGTCCAAAATGGAATTTATTCTTTAGTGCCAAAGTTACTGGAATCCACTGCAATGTTAGATGTACAAAATATAGCCTTAGGAGGAAAACATGCTGCCTTAGTTACAAAACAAGGGGAAGTGTTCTGCTGGGGACAAGGGAAATGGGGAAGGCTGGGGCAAAAAATTGATATGGACATTAGCTCTCCCAAAGTAGTTGATTCTCTTAGTGGTATTCATGTAAAACATGTTGCTTGTGGTGAGTATCATACAAGTGCTTTGACAGATTCTGGTGAAGTATATACATGGGGGAATGATGTTTGTTGTTCAGATTTAGTTGATGAAGGTAGAATTAGAAGTCAGTGGATACCACATAAACTTTCTGGACCTTTAGATGGTATTAGTATTTCAAGTGTTGCTTGTGGGGAATGGCACACTGCACTTGTCTCTAGCTGTGGACGGTTATTTACATATGGAGATGGTACATTTGGAGTACTAGGTCATGGGGATCTTCGGAGCTCTTCTAGACCAAAAGAAGTTGAATCTCTTAGTGGTCTAATGGTGAGGTCTGTTGCTTGTGGATCATGGCACACGGCTGCTATTGTTGAAGTCATGTTTGATCGTTTTAGGTACAATACTCCTACTGGTAAGCTTTTTACATGGGGTGATGGAGATGAAGGGAGGCTTGGTCATGCTGATAATGGAAGCAAGCTTGTACCAACATGTGTTGCACAACTTGTTGACTATGATTTTGTTCAAGTATCTTGTGGAAGAATGTTGACTGTAGCACTTACTAACATGGGGAAGGTTTTTGCAATGGGAAGTGCTAAATATGGACAGCTTGGAAATCCACATGCAAGGGATAAAGCAGTTATGGTTGAAGGACAACTTAAGCAAGAGTTTGTTAAAGTGATATCATCTGGTTCATATCATGTTGCTGTTTTGACATCTGCAGGGAGTGTGTATACATGGGGCAAAGGTGAAAATGGGCAATTGGGGCTAGGTGATACTGAAGACAGACATGTACCTTGTTTTGTTGAGGCTCTAAGAGACAGGCAGGTAGATACTATCACTTGTGGTCCAAGCTTCACAGCTGCAATATGTTTGCACAGACCTATTTCTATTAGTGACCAATCAACTTGTAGTGGTTGTAGGTTGCCATTTGGGTTCACAAGAAAGAAACATAACTGTTATAACTGTGGTCTTTTGTTCTGCCGTGCTTGTAGTAGTAAAAAGGTTATAAATGCATCTCTAGCCCCAAGTAAGAGCAAGGCCTTTCGGGTTTGTGATCAGTGCTTTGAAAGACAACAAGGAAGTACACATTCAGCTATGTCATCAAAGTCTAGAAATTACAATACTCAGCAGATATTGAAGCATCAAAACAAGATTGGTGATCTCACTGAAGATAGGGGAGAAACAACTGTGACACAAGGTCCTCTATTGTCTCTCAGTCAATCATGTTACAGGAAAAGCATGCCTAGTGGAAGGAAGGACTGGAAAAACCAACAAGAAAGCCAGCATGATTTAGAAGATGGTTCTTATAGGTTAGGTGGAATGCCACAATGTGGGAAAGTTCCCTGCCCTGTCCTATTTAAAAACAATAGTACAGAAAATTCAGCTGTGCATGTTTCTTCATCCAAAAATAAATTAGCTTCTGTTTCACCACTGAATGTAGAATCTACAGAATACAACTTCCCCAATGCAGAGACAGATACAATAAAGTCTGAGAAGATGCTCATAGAAGAAGTTCAGAAGCTGAGAGCTGAGGCTAAAAGACTTGAAGAGCAGTGTGAGCTCAAGAACAACAAAATACAAGAGTGTCAACAAAAAATTGAGGAGAGTTGGAGTGTAGCAAGGGAGGAAGCTGCTAAGTGCAAGGCAGCTAAAGAGGTCATAAAAGCTTTGGCATTAAGGCTTCATACAGTAACAGGAAAAGATAATGCTGGACAAGAAGGAAAGGTTGGGATACCTGAATTTCTTCCTAATTTGGCACCCATACATACAACAGATATGAATAGTCCAAGAGATGGAAACATGGACAGTCTATCCAATTCCCCTATAGTATTCTCTGACACTTTCAAATCCAAATTTGGGAAAAGTATGTTCCTAAAAAATGATAGATTGATGGAGAATTCTAACTTCACTAGAGCAGAACCTCAACAAGACACTGCAGATAGTTTGAAGGCGGAATGGGTAGAACAGTATGAGCCTGGTGTTTACATCACATTTACAACCTTGCCATGTGGTAAAAAGGGCCTTAAGAGAGTGAGATTTAGCCGGAAGCGGTTCTCACAGAAGGAAGCTGAAAGATGGTGGGAAGAGAATCAAGGCACAGTGTACAACAGGTATGAGATTGAAGGATATATGAACACTAGCCAAGGTCAGGTGAAAGGCTAA | 3228 | 0.4052 | MTMGGGEQSLAPLPFDRTLEQAIVSIKKGAYLLKCGRRGKPKLCPFRLSPDERNLIWYSGQQEKHLRLSAVTKIIQGQGNIRSQRQNEPEKECHSFSLIYANGERSLDLICKDKAQAASWFVGLKAVISRCQHPRTFSSLRSCKGVQSCVSSPAGILRRKKNLGLLDDNSQFTQVHSVCASPTLSLSERCFSDGLSYTSDNIYSSASFLSSTHGITDSVPSSPYIDSDIHRKIESTRVDKEHKNLSYRSLMPPTSPHVGNNNVLKDVMIWGGGIGCLVGIVNERFVQNGIYSLVPKLLESTAMLDVQNIALGGKHAALVTKQGEVFCWGQGKWGRLGQKIDMDISSPKVVDSLSGIHVKHVACGEYHTSALTDSGEVYTWGNDVCCSDLVDEGRIRSQWIPHKLSGPLDGISISSVACGEWHTALVSSCGRLFTYGDGTFGVLGHGDLRSSSRPKEVESLSGLMVRSVACGSWHTAAIVEVMFDRFRYNTPTGKLFTWGDGDEGRLGHADNGSKLVPTCVAQLVDYDFVQVSCGRMLTVALTNMGKVFAMGSAKYGQLGNPHARDKAVMVEGQLKQEFVKVISSGSYHVAVLTSAGSVYTWGKGENGQLGLGDTEDRHVPCFVEALRDRQVDTITCGPSFTAAICLHRPISISDQSTCSGCRLPFGFTRKKHNCYNCGLLFCRACSSKKVINASLAPSKSKAFRVCDQCFERQQGSTHSAMSSKSRNYNTQQILKHQNKIGDLTEDRGETTVTQGPLLSLSQSCYRKSMPSGRKDWKNQQESQHDLEDGSYRLGGMPQCGKVPCPVLFKNNSTENSAVHVSSSKNKLASVSPLNVESTEYNFPNAETDTIKSEKMLIEEVQKLRAEAKRLEEQCELKNNKIQECQQKIEESWSVAREEAAKCKAAKEVIKALALRLHTVTGKDNAGQEGKVGIPEFLPNLAPIHTTDMNSPRDGNMDSLSNSPIVFSDTFKSKFGKSMFLKNDRLMENSNFTRAEPQQDTADSLKAEWVEQYEPGVYITFTTLPCGKKGLKRVRFSRKRFSQKEAERWWEENQGTVYNRYEIEGYMNTSQGQVKG. | 1076 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca6g02395 | 1075 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 430 | 478 | IPR000408 | - | |
| Seca6g02395 | 1075 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 596 | 644 | IPR000408 | - | |
| Seca6g02395 | 1075 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 374 | 425 | IPR000408 | - | |
| Seca6g02395 | 1075 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 323 | 371 | IPR000408 | - | |
| Seca6g02395 | 1075 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 493 | 541 | IPR000408 | - | |
| Seca6g02395 | 1075 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 430 | 481 | IPR000408 | - | |
| Seca6g02395 | 1075 | SUPERFAMILY | RCC1/BLIP-II | 265 | 648 | IPR009091 | - | |
| Seca6g02395 | 1075 | Pfam | Pleckstrin homology domain | 20 | 126 | IPR001849 | - | |
| Seca6g02395 | 1075 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 596 | 647 | IPR000408 | - | |
| Seca6g02395 | 1075 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 654 | 725 | IPR013083 | - |
Showing 1 to 10 of 38 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca6g02395 | - | - | gmx:100797223 | 1854.34 |
Showing 1 to 1 of 1 entries