Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02366 ATGGGTGTCCAACGTGTGCTTTCAAAGTTTAGGAGAATGCCTGAATTGGAGCAGAGCAAGAAGATGGTGAACCAAGATAGTTTTCTGAGGCAGAGGATCCAAAAGGCCAAAGAACAGGTGAAGAAACAGAGGAAGGATAACAGGGAAAAGGAGATGACCCAACTCATGTTTCAGTGCCTAAGTGCAGGTAACATTATGCAAAATATAAGTATGGTTGATTTGAATGATTTGGCATGGTTGATTGACCAGAACTTGAAGGACATCAATAGAAGGATTGAAACATTGACTAAGAATGCTGCCCAAGCCCAAGCCCAAGCCCAAGCCCAAATGGCTGCACCACCACCAGTGTTGACTGATGTTAATGTAGTAGCCAAGATTGAAGAGAATGTACAAGGGAGTCATGACCAAGGATTGGATATGAACATGGATGTCATGCAAAAACAGCATTGGTTTATGAATTTGATGAATAGTGGTGGTGCGGATGAGACAATGCCTTTGGGAGATCTTAATCACCAAAATAGCTTTTGGCCAAACCCATTTTTCCATTGA 549 0.4226 MGVQRVLSKFRRMPELEQSKKMVNQDSFLRQRIQKAKEQVKKQRKDNREKEMTQLMFQCLSAGNIMQNISMVDLNDLAWLIDQNLKDINRRIETLTKNAAQAQAQAQAQMAAPPPVLTDVNVVAKIEENVQGSHDQGLDMNMDVMQKQHWFMNLMNSGGADETMPLGDLNHQNSFWPNPFFH. 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02366 182 Coils Coil 85 112 - -
Seca6g02366 182 Coils Coil 26 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02366 Seca-Chr6 85758570 85759118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02366 2 124 Type I MADS-box Gene Family AT5G48670 49.593 2.97e-36 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02366 - - gmx:100816084 260.766