Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02350 ATGGTCATAACTAACACCAGCCTTTCCCTCTTAATCTTCGCCACCGTTATTGTTGTTTCTCTCTCTTTCTCTTCCTCCTCCACGGATTTATTCCTCTACGGCGGGTGCACGCAACAAAGGTACAACCCTAACTCGCCCTACGAGTTCAACCTCAACTCACTCCTCACCTCGCTGGTCAACTCAGCCACCTACTCGTCCTACAACAACTTCACCGTCGTCGGCTCCTCCGCCAACGACGTCGTCTACGGCCTCTACCAGTGCCGCGGCGACCTCTCCATGCCGGACTGCGCCACCTGCGTCTCGCGCGCCGTCACCCGCTCCGGCGAAATCTGTCCGGCGACGTGCGGCGGCGTCATCCAGCTCGACGGGTGCTACGTGAAGTACGACAACGCGACGTTCTTGGGGACGGAGGACAAGACAGTTGTGCTGAAGAAGTGTGGGCCCTCGGTTGGTTACGACCCGGGTGAGAGGGACGCGGTTCTTTCCGGGTTGGCCGGTTCGGGTGGTTATTTTCGGGTTGGTGGTTCGGGTCGGTTGAAGGGTGTGGCGCAGTGCACTGGGGACTTGAGTTTCGCGGAGTGTCAGGATTGCGTGGCGGAGGCGATCCGACGGTTGAGAAGTGATTGCCCCGCGGCAGATTACGGGGACATGTTCTTGGCTAAGTGTTACGCCAGGTACTCCACTGGTGGGGCCCATGCTTACTCCAAGGCCCATGCAGGTAAATCGGACGACGAAGGTGAGAAGACATTTGCTATAATTATTGGATTATTAGCAGGTGTAGCTGTACTTATTATTTTCCTTGCTTTCTTGAGGAGGATTTGTGAGGGACAAGGTAAATAA 840 0.5595 MVITNTSLSLLIFATVIVVSLSFSSSSTDLFLYGGCTQQRYNPNSPYEFNLNSLLTSLVNSATYSSYNNFTVVGSSANDVVYGLYQCRGDLSMPDCATCVSRAVTRSGEICPATCGGVIQLDGCYVKYDNATFLGTEDKTVVLKKCGPSVGYDPGERDAVLSGLAGSGGYFRVGGSGRLKGVAQCTGDLSFAECQDCVAEAIRRLRSDCPAADYGDMFLAKCYARYSTGGAHAYSKAHAGKSDDEGEKTFAIIIGLLAGVAVLIIFLAFLRRICEGQGK. 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02350 279 ProSiteProfiles Gnk2-homologous domain profile. 134 231 IPR002902 -
Seca6g02350 279 FunFam cysteine-rich repeat secretory protein 3 28 133 - -
Seca6g02350 279 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Seca6g02350 279 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 8 274 - -
Seca6g02350 279 Gene3D - 159 229 IPR038408 -
Seca6g02350 279 Gene3D - 28 133 IPR038408 -
Seca6g02350 279 Pfam Salt stress response/antifungal 176 228 IPR002902 -
Seca6g02350 279 Pfam Salt stress response/antifungal 36 130 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02350 Seca-Chr6 85539617 85541566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02350 10 227 Pollen Coat Proteome AT4G20670 26.971 3.98e-18 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02350 - - gmx:100811615 426.402