Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02345 ATGAATGGAAAGCTTGGAGATTTTGGGTTAGCCAGAATACACAACCATGGTCAAATTTCTAGCACCACAAAATTGGTTGGAACAGTTGGGTACATGGCTCCTGAAGTGATTAGGACTGGATGA 123 0.4228 MNGKLGDFGLARIHNHGQISSTTKLVGTVGYMAPEVIRTG. 41
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02345 40 Gene3D Transferase(Phosphotransferase) domain 1 1 40 - -
Seca6g02345 40 ProSiteProfiles Protein kinase domain profile. 1 40 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g02345 40 SUPERFAMILY Protein kinase-like (PK-like) 2 40 IPR011009 -
Seca6g02345 40 PANTHER - 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02345 Seca-Chr6 85482938 85483060 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02345 1 40 Receptor kinase-like Gene Family AT3G08870 65.000 1.94e-14 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca6g02345 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02345 - - gsj:114386544 77.7962