Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02328 ATGTCCACAACAAGAATTCAAGTTTCGGCGTGCGCGCTGTCCGCCACCGTCAGCAACCTTCGCCTCCGCCCTAACGCCGTTTTTTCAACCAACTCCGGTTTCAGTTTCAGACCCCTCAGGAAGCCTCTCAGGGTCTCAATGTCTTCCGTTCCTCCTTCCGAGCCCTTCGAAATCGCCGTTAAAGCTTCTATCACCACACCCAACAGACTCGGCGACTGCCCTTTTTGCCAAAGGGTATTGCTGACACTGGAGGAAAAACATCTACCTTATGACCCGAAGTTTGTGGATTTGACCAACAAGCCAGAATGGTTCCTTACAATCAATCCTGAAGGTAGAGTTCCTGTGATAAAGTTTGATGAGAAGTGGGTTTCAGATTCAGATGTTATCACACAGACATTGGAAGAGAAGTATCCTAGTCCACCATTGGTGACCCCACCTGAAAAGGCCACAGTTGGGTCAAAGATCTTTTCTACATTTATTGGATTTCTCAAGAGCAAAGATCTCAATGATGGAACGGAGCAAGCATTACTAAATGAACTGAGCTCTTTCAATGATTACCTCAAGGAAAATGTATGGCTTTTTCTGATTCTGTGTCTCTGCTATTTGTTTGCAATCTTGATTGGCACTTCTGGTATCTGTCACTGGGATTTCATTGAAATCTTCCTTTTGATAGGTCCTTTTGTCAATGGGAGAGACATATCTGCAGCTGACCTGTCACTTGGACCAAAGCTATACCATTTGGAGATTGCTTTGGGGCATTATAAGAAATGGACAGTACCTGATTCACTTACCTACGTAAAGTCTTATATGGAGGCTGTTTTCTCGAGGGAATCATTCATTAAAACACGTGCCCAACCACAGGATGTCATTGAAGGCTGGCGTCCTAAAGTGGAGGGCTAA 900 0.4489 MSTTRIQVSACALSATVSNLRLRPNAVFSTNSGFSFRPLRKPLRVSMSSVPPSEPFEIAVKASITTPNRLGDCPFCQRVLLTLEEKHLPYDPKFVDLTNKPEWFLTINPEGRVPVIKFDEKWVSDSDVITQTLEEKYPSPPLVTPPEKATVGSKIFSTFIGFLKSKDLNDGTEQALLNELSSFNDYLKENVWLFLILCLCYLFAILIGTSGICHWDFIEIFLLIGPFVNGRDISAADLSLGPKLYHLEIALGHYKKWTVPDSLTYVKSYMEAVFSRESFIKTRAQPQDVIEGWRPKVEG. 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02328 299 SFLD Glutathione Transferase (cytosolic) 72 273 IPR040079 -
Seca6g02328 299 SUPERFAMILY GST C-terminal domain-like 216 296 IPR036282 -
Seca6g02328 299 Pfam Glutathione S-transferase, N-terminal domain 72 141 IPR004045 -
Seca6g02328 299 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 55 190 IPR044627 GO:0033355|GO:0045174|GO:0098869
Seca6g02328 299 SUPERFAMILY Thioredoxin-like 72 139 IPR036249 -
Seca6g02328 299 CDD GST_N_family 73 134 - -
Seca6g02328 299 FunFam Glutathione S-transferase DHAR3 chloroplastic 54 142 - -
Seca6g02328 299 SFLD Main (cytGST) 72 273 - -
Seca6g02328 299 Gene3D Glutaredoxin 55 142 - -
Seca6g02328 299 Gene3D - 143 299 - -
Seca6g02328 299 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 63 141 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02328 Seca-Chr6 85235051 85239384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02328 1 299 Glutathione S-transferase Gene Family AT5G16710 60.797 2.42e-121 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02328 K21888 - gmx:732557 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02328 6 85235051 85239384 Seca6g02328 6 85235051 85239384 ECH