Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02220 ATGGCCAGTTTAACACCAAATAGCATGATTGGTATTTTTCTCATTTGGTATAATATTATTGCTCTTTGTGGTGTAGAATACAAAGAAACCAAGAGCGGTGATGGTCATTGCAGCAGGGAAATCAGCCTTGGGGCCCAGAATCAAATCAATGAAAACTTGCAGATAGCTCAGGCTCTCCAAATGCAAATGGAAGTACAGAAGAAACTTTATGAACAAATTGAGGTAATAGCACATATGATAGGATTGAAACTTCCTCCTATGACCCTATCTGAATTCTGA 279 0.3835 MASLTPNSMIGIFLIWYNIIALCGVEYKETKSGDGHCSREISLGAQNQINENLQIAQALQMQMEVQKKLYEQIEVIAHMIGLKLPPMTLSEF. 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02220 92 Pfam MYB-CC type transfactor, LHEQLE motif 53 75 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02220 Seca-Chr6 82996454 82996899 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02220 50 79 G2-like Transcription Factor Family AT1G69580 70.000 3.21e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02220 - - gmx:100787178 88.5817