Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02206 ATGGACGGGTTGATGCAGATTGAAGATGATGATGGTAACAAATTGAGTGACAGAGAAGTAGTAGAGAACATTGTCTCTCTTGTGGCGGGTGGATATGCCTCTACTGCCCTTGTATCGATGTGGGCTATTTACCTTCTTGCCAAGTATCCAAGTGTGCTCAAAAGTCTAAGGGAAGAGAACATGAATTTCAAAAAGGGAAGTCCAGAGGATCTTATTACAGTTAAAGATGTTTCAAATTTGAAATACACAAACAAGGTTGTTGAAGAGGTAATAAGAGTGGCAAATGTTGCAGCCTTTGTATTCAGAAAAGTTGAAAAAGATGTAGATTATAAAGGTATGCGATTGCAATTTTTTAGAAAACTAGTAAGCAAGAGATTGAATTACTTATTAAGGAATGAGCCAGCCAAGCCTAGAACTTACCAAGTCTTTGGTTCTGGACAAAGACTCTGCCCTGGAAACATGCTTGCAAGAATTCAACTTTCACTTCTACTTCATCATTTGTCCATAGGATACAAGTGGGAACTCCTTAATCCAAACGCAGATATAATTTATCTCTCACATCCAGCTCCAGTAGATGGGGTTGAGGTTAAGTTCAGCAAATTATGA 606 0.3845 MDGLMQIEDDDGNKLSDREVVENIVSLVAGGYASTALVSMWAIYLLAKYPSVLKSLREENMNFKKGSPEDLITVKDVSNLKYTNKVVEEVIRVANVAAFVFRKVEKDVDYKGMRLQFFRKLVSKRLNYLLRNEPAKPRTYQVFGSGQRLCPGNMLARIQLSLLLHHLSIGYKWELLNPNADIIYLSHPAPVDGVEVKFSKL. 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02206 201 PRINTS E-class P450 group I signature 84 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02206 201 PRINTS E-class P450 group I signature 19 36 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02206 201 PRINTS E-class P450 group I signature 140 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02206 201 PRINTS E-class P450 group I signature 150 173 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02206 201 PRINTS E-class P450 group I signature 39 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02206 201 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 143 152 IPR017972 GO:0005506|GO:0016705
Seca6g02206 201 PANTHER CYTOCHROME P450 26 8 186 - -
Seca6g02206 201 PRINTS P450 superfamily signature 30 47 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02206 201 PRINTS P450 superfamily signature 141 150 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02206 201 PRINTS P450 superfamily signature 150 161 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02206 201 PRINTS P450 superfamily signature 85 96 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02206 201 SUPERFAMILY Cytochrome P450 1 199 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02206 201 Gene3D Cytochrome P450 1 120 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02206 201 Gene3D Cytochrome P450 127 201 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02206 201 Pfam Cytochrome P450 132 175 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g02206 201 Pfam Cytochrome P450 4 113 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02206 Seca-Chr6 82731687 82733280 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02206 1 200 Cytochrome P450 AT2G32440 28.111 1.72e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02206 - - mtr:25479949 291.197