Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02157 ATGGAATTTGAAAGTCTATATCCACCAAATCGGTTTGATGAAGAGATGTACAGCACAGAATCTACTAGTGAAGAGAACATTGTCCTTGATGTGATGAAGCACTATGATGAATTTGTAGAAGAAATGACTCAGATAGAAGCTGCAGTAGTTCCTGGATATCCCACCTCTTCTTTCTGCATTGAGATGGTTGACAACCTGCAGGGTCATGATCGATGCAAAAAGAGTCCTGCAACTGCCAAGGGTTCTCATCAGGAGAGAAAGAAAGTGGTTCGTTGGACAAAAGAGGAGCATGAACGCTTTCTGATGGGACTTAAGAACTATAGCAAAGGGCATTGGAAAAATATCGCTCGTTATTTTGTAATCACAAAGACTCCTACTCAAGTGGCAAGCCATGCTCAAAAGTACTTCCTAAGACAAAAGCTTTCTGGAGGGAAAGATAATAAAAGGAGGTCTAGTATCCATGATATCACCATTGATAATCTTACAGAGCCTACAACTAATTCAGGTCAAGACAAGCCTATTTTGTTCAATGAGTCTCTCATGCCAATTGTGCAACCAGAAGGGATTAATCACCACAATGAGGAGCCACTCATGGAGGTTTTCAATCCAAATTATCAGTCTCTCATGCCAAATGTGCAAGCAGAAGGGATTAATCACCACAATGAGGAACCACTCATGGAGGTTTTCAATCCAAATTATGAGTCTCTCATGCCAAATGTGCAACCAGAAGGGATTAATCACCACAATGAGGAACCACTCATGGAGGTTTTCAATCCAAATTATGAGTCTCTCATGCCAAATGTGCAACCAGAAGGGATTAATCACTACAATGAGGAGCCACTCATGGAGATCAATCCAAATTATGATGATATATTCATGTTTCCCTCATCTGATATCTATTCCGAGACCCTCAAGTTTCAAGGTCAGTAG 930 0.4075 MEFESLYPPNRFDEEMYSTESTSEENIVLDVMKHYDEFVEEMTQIEAAVVPGYPTSSFCIEMVDNLQGHDRCKKSPATAKGSHQERKKVVRWTKEEHERFLMGLKNYSKGHWKNIARYFVITKTPTQVASHAQKYFLRQKLSGGKDNKRRSSIHDITIDNLTEPTTNSGQDKPILFNESLMPIVQPEGINHHNEEPLMEVFNPNYQSLMPNVQAEGINHHNEEPLMEVFNPNYESLMPNVQPEGINHHNEEPLMEVFNPNYESLMPNVQPEGINHYNEEPLMEINPNYDDIFMFPSSDIYSETLKFQGQ. 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02157 309 ProSiteProfiles Myb-like domain profile. 84 136 IPR001005 -
Seca6g02157 309 CDD SANT 91 136 IPR001005 -
Seca6g02157 309 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 25 219 IPR043363 -
Seca6g02157 309 SMART sant 88 138 IPR001005 -
Seca6g02157 309 Pfam Myb-like DNA-binding domain 91 136 IPR001005 -
Seca6g02157 309 NCBIfam myb-like DNA-binding domain, SHAQKYF class 87 139 IPR006447 GO:0003677
Seca6g02157 309 Gene3D - 90 141 - -
Seca6g02157 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 140 IPR017930 -
Seca6g02157 309 SUPERFAMILY Homeodomain-like 85 140 IPR009057 -
Seca6g02157 309 FunFam transcription factor MYB1R1 90 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02157 Seca-Chr6 81902525 81903718 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca6g02157 Myb_DNA-binding 2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02157 - - gmx:100783469 211.846