Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02123 ATGGATCCTATGATTGAAGATTTTATTTTTAATATGATGAAACCTACTGAAACTGACAAAACTTTTGAGGGTGATCCCAAAAATTCTAAATCCCCCAATAAAGATAATTTGGATTCTGATAAGGATCCTGAAGTTTGGAAAAGGATAAGTGAACTAACAGATGAGGATATTAGAGGGCTTGAGTTTGATACTGAAGAGGATGCATATGATTTCTATCGTGAGTATGCTAAATTCATAGGATTTTCTGTAAGGAAAGGTGATGTGTATAGAAATTGTAATGGTACAATTACAATGAGGCAATTGGTTTGTAATAGAGAGGGAGAGAGAAGTGAGAAGCATCTTAATAGGACTGATAGAATTAGGGAGGCAAAGGCCCTCACCTGA 384 0.3542 MDPMIEDFIFNMMKPTETDKTFEGDPKNSKSPNKDNLDSDKDPEVWKRISELTDEDIRGLEFDTEEDAYDFYREYAKFIGFSVRKGDVYRNCNGTITMRQLVCNREGERSEKHLNRTDRIREAKALT. 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02123 127 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 33 119 - -
Seca6g02123 127 MobiDBLite consensus disorder prediction 18 42 - -
Seca6g02123 127 MobiDBLite consensus disorder prediction 13 42 - -
Seca6g02123 127 Pfam FAR1 DNA-binding domain 70 121 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02123 Seca-Chr6 81327433 81328137 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca6g02123 FAR1 7.4e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02123 - - ccaj:109792835 100.138