LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca6g02118	ATGGCCGCCGCCGCCGCCGCTACCACGTCATACTTTTTTGGCACCCGTCTCAGTAACCCAACTTCAAACACCGGAAGATTCCACGCCTTCTTCAACTTCGGCACCAAGAAGGCACCACCACCGCCACCACCACAGAAGAAAAAGGAGGTGAAATTGAAAACCAGTGATGACCGGCTCGTGTGGTTCCCGAATGCAGAGCCACCGGAATGGCTCGACGGGTCCATGATCGGAGACCGTGGGTTCGACCCATTTGGGTTCGCGAAACCCGCTGAGTACCTACAATTCGACCTTGACTCGCTCGACCAGAACCTCGCCAAGAACGTCGCCGGCGATATAATCGGAACCAGGATCGAGACCATTGAGGTTAAACCGACGCCGTTTCAACCCTACACAGAGGTCTTCGGAATACAGAGGTTCCGTGAGTGCGAGCTCATTCATGGAAGGTGGGCCATGCTTGGAGCTCTCGGTGCCTTGGCCGTTGAGGCTTTCACTGGGGTCGCATGGCAAGACGCTGGAAAGGTAGAGCTGGTGGAAGGGGCATCCTACCTAGGACTTCCTCTTCCATTCTCATTGACCACATTGATCTGGATTGAGGTGTTAGTGATTGGCTACATTGAGTTTCAAAGAAATGCAGAGCTTGACCCAGAGAAAAGGTTATACCCAGGTGGCAAGTTCTTTGATCCTTTGGGCTTGGCCAATGACCCTGAAGAGAAGGCCAGACTTCAACTGGCAGAAATCAAGCACTCTCGCTTAGCTATGGTGGTCTTCCTCATCTTTGCAATTCAAGCTGCTGTAACAGGAAAAGGCCCTATCAGTTTTATTGCTACCTTCAACAAGTGA	840	0.5226	MAAAAAATTSYFFGTRLSNPTSNTGRFHAFFNFGTKKAPPPPPPQKKKEVKLKTSDDRLVWFPNAEPPEWLDGSMIGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKNVAGDIIGTRIETIEVKPTPFQPYTEVFGIQRFRECELIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGASYLGLPLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKARLQLAEIKHSRLAMVVFLIFAIQAAVTGKGPISFIATFNK.	280

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca6g02118	279	SUPERFAMILY	Chlorophyll a-b binding protein	57	276	-	-
	Seca6g02118	279	Gene3D	Chlorophyll a/b binding protein domain	59	279	-	-
	Seca6g02118	279	PANTHER	CHLOROPHYLL A/B BINDING PROTEIN	30	275	IPR001344	GO:0009765\|GO:0016020
	Seca6g02118	279	Pfam	Chlorophyll A-B binding protein	67	263	IPR022796	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca6g02118	Seca-Chr6	81232427	81235362	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca6g02118	13	276	Chloroplast and Mitochondria Gene Families	AT3G08940	72.075	2.14e-136	385

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca6g02118	K08915		-	gmx:100820335	500.745