Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02109 ATGGAAGCTATGGATCATTTTGATCCATATCAGAAGCGAGAAGCAGTTGCAGGATGTTACCAAACAGTTGTGTCTAATCCCAATGCAATATGGCAAAGTGAAAGTGTCCTAACGTACTACCTTCCTGCCTTTGCAACCCAAGTTGCTTTCATGTTGATCTCCACTCGTTGTATATACTTCATCCTTAGACCCTTACATCAACCTCGTATTGTTATTGAGATTTTGATGGGTTTCATGATAAGTCCAGAAGTGCTTGGGTCAACACCCTTGTTTGAAGTTTTAGTTCCTCTAAAATCAGTCATATCAACTGAAACCATATCATATATGGGACTCATTTACTATGTCTTCCTTGCTGGCTTGGACATGAACTTGGACACTATTCTAAGAGCAAGAAAGAAAGCTACAACCATAGCTATTGCAGGCATTGTAATTCCAATGGTAATGGGGGCTGGAATATATGCATTGCTTCAAAGCATGTATGAGGCACCTTCTGAGTATCTGTCACATCACAGCAGAGCTAAGGCATATTTGTTCTGGGCCTTAGTTTTTAGTGTCACAGGTTTTCCTGTGGTTACTCAAATCCTTGCAGACCTCAAGCTCCTCTATACAGGTCTGGGAAAGGTGGCCTTGACAGCAGCTATGATTACTGACTTCTATAATTGGGTCATATTTGCATTGTTGATTCCATATGCTCTTAATGAAGGAAGTCCCATGTTTTCTGTGCTCAGCACCATAGCTTTTGTCCTTTTTTGCTTCATTGTGGTACGCCCTTATCTGGTGCAGTTGATAGTTCGAAAAACCAATCAGAATGAGTGGGACAACTACCAAATGTTCTGTGTGATGATGGGGGCTTTTGCTTGTTCAACAGTCACAGATCTCCTTGGGACACACCCTGTTGTTGGGGCTCTAATGTATGGAATAATGATACCTCGTGGGAAATTTACTGAAATGCTGAAAGATAAGACAGAGGATTTTGGAGTTGTTTTTCTGGGTACACTCTTCTTTGGTAACTGTGGCATAAGACTCAGAATAATATCTGTTATACAAACACAAGGTTTTCTCCTGGTGCTGGCAATTATGTTGTTAACATGCATACCAAAGATTTTAAGCATTGTGATAGCAACACAATTCTTTGGTATGCCTGCTCGTGATAGTGTGGCAATTGGACTACTTATGAACACCAAAGGTGTCTTACCATTTATAGTGCTCAACATTGCCTGGGACAAACAGGTTATTAGTGTGGAGTCCTACTCAATTTTGACAACATCTGTTCTTGTAATGACAATAATGGTGCCTCTTATCATCAATGCCATATACAAGCCAAGAAAGCTATATAAGCAAAATAAGCTAAGGACTATACAGAATTTAAAGGCTGAAGCAGACCTCAGAGTTTTGGCTTGTGTTCACAACCCTCGCCAAGCCACAGGAATGATCAGCATCCTTCAAGCCTGCAATGCTGTTAAACTCTCCCCTTTACGTGTGTTTGCTCTTCAGCTTATTGAATTAACTGGAAATAACACTTCCCTTTTGGCTGCACACCTTGATCAGCCAAACCAACAGCAGAATGGAGAACAAGTCCTCACACAAACACAACATGATATGGAAATCATCACCAACACTTTTGAATCTTTATGTGCTGCTGATAATCAAAACACTAGAGTGGAGACACTTGCTGCTGCTTCCACCTACTCAACCATTCATGAGGATATATACACTTTGGCACAGGAGAAGCAAGCAACCTTGATTCTCCTTCCATTTCATAAGCAATCAAGCATAGAAGGTATTCTAGAGATAACCAACAGTGCATTTAAGCACATAAACCAAAATGTCATGAAAGATGCACCCTGTTCTGTGGCAATCTTTGTTGATCGTGGTCTTGGGTCATTGTTCAAAGTCAACTTGCGTGTCATTATGGTTTTCATTGGTGGTCCTGATGACCGTGAAGCCTTAGCTGTTGCATGGAGGATGTCAAAGCATCAAGGGATTCAACTATCAGTGGTGAGGATTCTTTTGTTAGGGGAGGCTGCAGAAGCAGATACAACACCCCAGTTAGAATCTCGAGGGCTATTGTCTGCAGTAGTAGACTATGAAAGGCAAAAGGAATTGGATGATGAGTATTTGAGTTTATTTAGACTCCATGCAGTGAACAAAGAGGATTCTATAACTTATTCAGAAAAAGAAGTTAACTCACGTGATGATATTGCTGAAGTTCTAAATCAAATAGACCAAATTGGATGTGATTTGTACATTCTAGGACAAGGGACAGGTAGGCACTCTTTGGTCTTGTCAGAGTTAATGAAATGGACTGATTGCCCGGAACTTGGAGTTATAGGGGACATGATGGCATCAAATAATTTTGGTTCATCCTCTTCAATCCTTGTTGTACAACAATATGGGTTCGGGGGAATGGTATTTGAGACTACCACTCGGAATCCTAGTGAAGTGCCAGCAAACAATGATGGTTCAGATGCACATTTTGTGGAGATAGAATAG 2493 0.4079 MEAMDHFDPYQKREAVAGCYQTVVSNPNAIWQSESVLTYYLPAFATQVAFMLISTRCIYFILRPLHQPRIVIEILMGFMISPEVLGSTPLFEVLVPLKSVISTETISYMGLIYYVFLAGLDMNLDTILRARKKATTIAIAGIVIPMVMGAGIYALLQSMYEAPSEYLSHHSRAKAYLFWALVFSVTGFPVVTQILADLKLLYTGLGKVALTAAMITDFYNWVIFALLIPYALNEGSPMFSVLSTIAFVLFCFIVVRPYLVQLIVRKTNQNEWDNYQMFCVMMGAFACSTVTDLLGTHPVVGALMYGIMIPRGKFTEMLKDKTEDFGVVFLGTLFFGNCGIRLRIISVIQTQGFLLVLAIMLLTCIPKILSIVIATQFFGMPARDSVAIGLLMNTKGVLPFIVLNIAWDKQVISVESYSILTTSVLVMTIMVPLIINAIYKPRKLYKQNKLRTIQNLKAEADLRVLACVHNPRQATGMISILQACNAVKLSPLRVFALQLIELTGNNTSLLAAHLDQPNQQQNGEQVLTQTQHDMEIITNTFESLCAADNQNTRVETLAAASTYSTIHEDIYTLAQEKQATLILLPFHKQSSIEGILEITNSAFKHINQNVMKDAPCSVAIFVDRGLGSLFKVNLRVIMVFIGGPDDREALAVAWRMSKHQGIQLSVVRILLLGEAAEADTTPQLESRGLLSAVVDYERQKELDDEYLSLFRLHAVNKEDSITYSEKEVNSRDDIAEVLNQIDQIGCDLYILGQGTGRHSLVLSELMKWTDCPELGVIGDMMASNNFGSSSSILVVQQYGFGGMVFETTTRNPSEVPANNDGSDAHFVEIE. 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02109 830 Gene3D - 459 774 - -
Seca6g02109 830 Gene3D - 43 448 IPR038770 -
Seca6g02109 830 MobiDBLite consensus disorder prediction 810 830 - -
Seca6g02109 830 PANTHER CATION/H + ANTIPORTER 28 798 - -
Seca6g02109 830 Pfam Sodium/hydrogen exchanger family 51 438 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02109 Seca-Chr6 81087873 81090871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02109 19 798 Antiporter Super Family AT2G13620 37.800 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02109 - - gmx:100802381 1147.11