Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02105 ATGGAGGGACATATGGTGGAAGCAAAGATATGCCAGAAGTACAGCAAAACATGGTCAGGGTGGTGTGGCAACTCTAACCACTGTGACAACCAGTGCAAGAAATGGGAAGGTGCAAAGTTTGGATCATGTCACTATGATTCACGTGGACGGGCTTGTTTCTGTTACTTCAATTGTCCAGGTTTATGTGCCAAGCGCAGCAAAACATGGTCTGGGATATGTATCAGCTCCAAAAACTGTGACAAGCAATGTAGGACTAAGGAAGGTGCCAGTCACGGAGCTTGTCATGGCAACCTCTCTGGACGGGCTTGTGACTGTTACTTCAAATGTTAA 330 0.4636 MEGHMVEAKICQKYSKTWSGWCGNSNHCDNQCKKWEGAKFGSCHYDSRGRACFCYFNCPGLCAKRSKTWSGICISSKNCDKQCRTKEGASHGACHGNLSGRACDCYFKC. 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02105 109 SUPERFAMILY Scorpion toxin-like 61 109 IPR036574 -
Seca6g02105 109 SUPERFAMILY Scorpion toxin-like 8 58 IPR036574 -
Seca6g02105 109 ProSitePatterns Gamma-thionins family signature. 9 32 IPR008176 GO:0006952
Seca6g02105 109 PANTHER DEFENSIN-LIKE PROTEIN 1 6 55 - -
Seca6g02105 109 Pfam Gamma-thionin family 61 109 - -
Seca6g02105 109 Pfam Gamma-thionin family 9 58 - -
Seca6g02105 109 Gene3D - 61 109 IPR036574 -
Seca6g02105 109 Gene3D - 10 58 IPR036574 -
Seca6g02105 109 SMART gth_4 10 58 IPR003614 GO:0006952
Seca6g02105 109 SMART gth_4 61 109 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02105 Seca-Chr6 81012974 81015534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02105 2 58 Plant Defensins Gene Families AT1G19610 57.895 1.63e-19 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02105 - - mtr:25500300 119.398