Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02102 ATGTTGTTGGTGGTTCTTGATTTCAGAACAAGGCTAGAGATCCAAGCTGATTCTGCATGTGTGGACCTGAGGTCCAGATGTCCATTCTTTTATGAATTTGGTTGCAAGATAGCACCCATAGTTGGCGACAGAACCATCGGGTTTCTGTTGTTGTCTGCATTTAAGAGTAGGTACAAGGAAGTCCTCACGAAGGCACATACTTTAGCATTTGCAGCTGGTTCCAAATTTTGGACTATTCTGACGAAAGAAGAGATCAATTTGTATGAGACAGCTCAATCCGCAATGGCATCCTTCAAGAAGTGGCGAATGGGGGGGCCCAGATTTCAGATAGCTTCTGTTCTCGGAAGAAAGAGAAAACCAGCTGAATAG 369 0.4417 MLLVVLDFRTRLEIQADSACVDLRSRCPFFYEFGCKIAPIVGDRTIGFLLLSAFKSRYKEVLTKAHTLAFAAGSKFWTILTKEEINLYETAQSAMASFKKWRMGGPRFQIASVLGRKRKPAE. 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02102 122 SUPERFAMILY GINS helical bundle-like 9 103 IPR036224 -
Seca6g02102 122 Gene3D - 5 103 IPR038437 -
Seca6g02102 122 PANTHER UNCHARACTERIZED 9 120 IPR010492 -
Seca6g02102 122 CDD GINS_A_psf3 9 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02102 Seca-Chr6 80981356 80982889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02102 6 119 Core DNA Replication Machinery Family AT3G55490 67.544 7.72e-54 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02102 K10734 - gmx:100799874 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02102 6 80981356 80982889 Seca6g02102 6 80981356 80982889 ECH