Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02097 ATGGGTTCTGTTTCCAAGGGAAGGATGAGAATGAAAAAGGAGATGTACAAGTACAAGGTGTTAAATTTCTTGACCAGAAAAGGTGGAGTCAACGAGCCAGAACCACCTTTGGATCTTAAGGAAGCTTTTTCCAAATTTGCCAATGGTGGGAACTGTATGTCAAAGGATCAGCTCCTTCGGTTCATGGTGGAGCACCAGGGAGAAAAGAACTTCACTTTAGCGGATTTGGAGCCAATTGTTGACAAGGTTTTGCAGGTAGAAAATTCTAGCACTGTTGCAGATGTGAACAACGGACAAGGACTCAGTCTCAATGACTTCATCAATTTTCTGCTTCTTGATGATTTCAATGGTCCCTTGAAAGACAAGGTACATCATGATATGAGTGCGCCCTTGTCACATTATTTCATGTATACAGGACACAATTCCTACCTGACTGGGAATCAACTTACCAGTGAGAGCAGTGACGAGCCAATTATAGAAGCTTTACAACAAGGAGTACGAGTAATTGAACTAGATTTATGGCCATCTTCAACTAAAGATGGTGGTATTAAAGTAGTTCATGGAAGGACTCTTACCACTCCAGTCTCACTAACCAGATGTCTGGAATCCATAAAGAAATCTGCTTTTGTCAAATCAGATTTTCCAATGATTCTAACTTTGGAAGACCACCTAACATCAAAACTTCAGGCTAATTTTGCAGAAATGGCAACTCAGATATTTGGAAAAATGCTTTATTTTCCTCAGACAGATTCTTTGACAGAGTTCCCCTCACCAGAATCATTGAAAAATAGGATAATTATATCAACCAAACCACCAAAGGAATATCCGCAATCTGACAGTATCACCAGTCCTGTGTCAAATGGAAGTGAATCATCTGAAGAAGAACCATGGGGACAAGAATTGCCAGATTCTATGACTAAACTGAAAATTGATGACAAGAATGCAAGTGATGAAGATGAGGAAGATATAATTATAAACACATGTGATAACAAACCAAACCAGCAAGGTTCACGTCAATACAAACACTTGATTACAATCCATGGTGGGAAATCAAAAGGTTCTCTGAAGGATCGACTGAGAGTTGATGGTAATCTTAGACGGCTAAGTTTGAGTGAGAAGAAACTCAAAAGTGCTTCTGAATCTCATGGAGCTGACCTTATTAGGTTCACACAGAAACATATCCTCAGAGTTTATCCTAAAGGAGAACGTGTCAAATCCTCAAATTTTAGGCCACATTTAGGGTGGATGTATGGAGCACAGATGGTGGCATTCAATATGCAGGGGTATGGCAAATCACTCAGGTTGATGCAGGGAATGTTCAGAGCAAATGGAGGGTGTGGTTATGTAAAAAAGCCTGAATTTCTGATGAGAAATCTTCCACGTGAAGAGGAGTTTGATCCTAAAAGAACATTGCCAGCAAAGCAGATACTAAAGGTAAAAGTATACAAAGGAGATGGTTGGAAGTCAGATTTTAGTCCAACACATTTTGATCTATTCTCTCCACCAGACTTTTACACAAAGATGTGCATTGTTGGAGTGCCAGCTGATTGTAATAAGAAGAAAACAAGTGTAAAGATGGACAATTGGTATCCTGTTTGGGATGAAGAGTTTGAGTTCCCTTTGACTGTACCTGAGCTTGCTTTGCTCCGTATAGAAGTAAAGGATAAAGATCAGACAAAGGATGACTTTGCAGGACAGACTTGTTTGCCAGTATCAGAGCTAAGACATGGATTTCGGCAATTAACCTCCATGGCCACTCACAACTACAAAGTCTTCAGCTGCTTCAATAGGAAGTTCAAAATCACCGAACCGGGCCCACCGCCCGATGTGGAACGAGCCTTCTCCGAGTTCACCGGCGGCGCAACCTCCATGTCCGCCGATCAACTATGCCGCTTCCTGACGGAGCAGCAGGGCGAACTGGACTGCACACCTTCGGATTCCGAACAGATCATCTCGCAATCGCTCGAACAGGATGGCGTGAATTCCGATGGAGGACTCAGCCTCCACCAATTCTTCCATTTCTTGTTCCAACATGATTTCAATAGCCCCTTGAAATCCCAGGTACATCATGACATGAATGCTCCATTGTCACATTATTTTATATATACTGGGCACAATTCCTATCTGACTGGGAATCAACTGAGCAGTGACTGCAGTGATGTGCCAATCATAAAGGCTTTGCAACGAGGTGTGCGAGTAATTGAACTAGATATATGGCCAAATTCAACTGAGGATGATATCGATGTAGTTCATGGAAGAACTCTTACCACTCCTGTCACACTTAGCCAGTGTTTGAAGTCCATTAAAGAGTATGCTTTTGTTAAATCTCACTACCCCGTCATTATAACTTTAGAAGATCACCTTACTCCAGATCTTCAAGCTAAAGTTGCAGGGATGGCAACTCAAATATTTGGAGAACTGCTTTATTATCCTCAGACAGATTCTTTGACAGAATTCCCCACCCCAGAATCATTGAAAGGTCGAATTCTTATATCAACCAAACCACCGAAAGAATATCTTGAATCCAAGCAATGTAATGACAAGGAGTTAACTGATGAAGGATCATCATCACCAGATGCACTGGAAACTGATGTCAGGAGTGCACCTGAGTATAGACACTTGATTACAATCCATGCTGGGAAACCGAAGGGTGATATACAGGATGAATTAAAAGCTGTTGGTCAAGTTAGGCGCTTAAGCTTGAGTGAACAGGCACTTGAAAAGGCTTCTGATTGTTATGGAGCTGATATTGTTAGGTTTACACAGAAAAATATTCTCAGAGTGTATCCAAAGGGAACACGTGTCACCTCCTCAAATTACAAGCCACACATAGGGTGGATGTACGGAGCTCAGATGGTTGCATTTAACATGCAGGGGCATGGCAAATCACTCCGGTTCATGCAAGGAATGTTCAGAGCAAATGGAGGGTGCGGTTATGTGAAAAAGCCTGAATTTCTAGTTGAAAAAGGTCCTCATGATGAGGTTTTTGATCCTAAAAGAACATTGCCAGTGAAGAAAACATTAACGGTAAAAGTCTATATGGGGAACGGTTGGTCCTCAGATTTCAGCCAAACACACTTTGATTCATACTCACCACCAGACTTTTACGTAAAGGTTTGTGTTGTTGGAGTTCCTGCTGATATGGCCAAGAAGAAAACAAGGGTAATTTCAAATAATTGGTTTCCTGTGTGGGATGAAGAGTTTGATTTCCCTTTGACAGTTCCAGAGTTGGCTTTGCTCCGTATAGAAGTTCGAGAGCATGACAAACATGAAAAGGATGACTTTGGTGGACAAACGTGTTTGCCAGTCTCAGAGCTAAAATCTGGATTCCGATCAGTCCCTCTGTATGATGAGAAGGACAAAGGAATGTCCAAATCCAAACAGACTTACAGCGTTTGCTTTTGCTGCCGGCGCCGCTTCAAGCTCGCCGTGTCGGAGGCCCCGCCGGAGATTATGGACCTTTTCCAGCGCTACTCTGATGAGAATGGGATCATGACAGCTTCTCATCTACGCAATTTCCTCGTTGAGGTGCAGAGACAAGAGAAGACCACCGAGGAAGAAACTCAGGCCATCATCGATGGCCACAAGCATTTGAGTATCTTTCATCGAAGGGGCCTCAATCTCGAGAGTTTCTTCAAGTACCTCTTCAGTGACGATAACCCTCCCCTGTTACCGTCTCGTGGGGTGCACCAAGATATGACTTTACCATTGTCTCATTATTACATACATACTGGTCATAATTCCTATCTAACTGGAAATCAGCTTAGCAGTGACTGCAGTGATGTCCCCATCATCAATGCACTGCAGAGAGGTGTAAGGGTGATTGAGTTAGATATATGGCCTAATGCATCAAAGGATAATGTGGATGTTCTTCACGGAAGGACGTTGACTACTCCTGTAGCGCTCATCAAATGTTTGAAGTCTATTAAGGAGCATGCCTTTGTCGCATCAGAATATCCAGTTGTAATAACCTTAGAAGACCACCTTACTCCCGATCTTCAGGCCAAAGTGGCTGAGATGGTTACTCAAACATTTGGAGACATACTATTTTGTCCTACCTCAGAAAGCATAAAGGAATTCCCATCTCCTGAATCACTTAAAAGGAGGATTATCATATCAACCAAACCACCTAAGGAGTACCTTGAGGCAAAAGAAGTAAAAGAAAAGGAGGAGGAACCACAGAAGGGAAAACCTTCAGATGATGAAGAAGCATGGGGAAAGGAAGTGCCGAGCTTGAGAGGTGGTACCATAACTGATTACAAGCCAAAAGGTGGATTAGAGGAATGTCTCAAAGTGGATCCTGATAAAGTCAGACGTCTAAGTTTGAGTGAGCTACAGCTTGAAAAGGCTGTTGTAACTCATGGAAAAGAAATTGTCAGGTATCGTTCACTATTTCCAGTGGGAATTGCTGGAGTCCCTTCTGATACTAATATGAAAAAAACCAAGACAATAGAGGATAGTTGGTTGCCTTCTTGGAATGAGGTATTTGAGTTCCCACTTACTGTTCCAGAATTGGCTCTGCTTCGCATAGAAGTTCATGAGTATGACATGTCTGAGAAGGATGACTTTGGTGGGCAAACATGCTTACCTGTGTGGGAATTAAGAAGTGGAATTCGAGCAGTTCCACTGCATTCCCGCAAAGGAGATAAGTACAACAATGTAAAGCTTCTCATGCGCTTTGAGTTCATCTGA 4692 0.4237 MGSVSKGRMRMKKEMYKYKVLNFLTRKGGVNEPEPPLDLKEAFSKFANGGNCMSKDQLLRFMVEHQGEKNFTLADLEPIVDKVLQVENSSTVADVNNGQGLSLNDFINFLLLDDFNGPLKDKVHHDMSAPLSHYFMYTGHNSYLTGNQLTSESSDEPIIEALQQGVRVIELDLWPSSTKDGGIKVVHGRTLTTPVSLTRCLESIKKSAFVKSDFPMILTLEDHLTSKLQANFAEMATQIFGKMLYFPQTDSLTEFPSPESLKNRIIISTKPPKEYPQSDSITSPVSNGSESSEEEPWGQELPDSMTKLKIDDKNASDEDEEDIIINTCDNKPNQQGSRQYKHLITIHGGKSKGSLKDRLRVDGNLRRLSLSEKKLKSASESHGADLIRFTQKHILRVYPKGERVKSSNFRPHLGWMYGAQMVAFNMQGYGKSLRLMQGMFRANGGCGYVKKPEFLMRNLPREEEFDPKRTLPAKQILKVKVYKGDGWKSDFSPTHFDLFSPPDFYTKMCIVGVPADCNKKKTSVKMDNWYPVWDEEFEFPLTVPELALLRIEVKDKDQTKDDFAGQTCLPVSELRHGFRQLTSMATHNYKVFSCFNRKFKITEPGPPPDVERAFSEFTGGATSMSADQLCRFLTEQQGELDCTPSDSEQIISQSLEQDGVNSDGGLSLHQFFHFLFQHDFNSPLKSQVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALQRGVRVIELDIWPNSTEDDIDVVHGRTLTTPVTLSQCLKSIKEYAFVKSHYPVIITLEDHLTPDLQAKVAGMATQIFGELLYYPQTDSLTEFPTPESLKGRILISTKPPKEYLESKQCNDKELTDEGSSSPDALETDVRSAPEYRHLITIHAGKPKGDIQDELKAVGQVRRLSLSEQALEKASDCYGADIVRFTQKNILRVYPKGTRVTSSNYKPHIGWMYGAQMVAFNMQGHGKSLRFMQGMFRANGGCGYVKKPEFLVEKGPHDEVFDPKRTLPVKKTLTVKVYMGNGWSSDFSQTHFDSYSPPDFYVKVCVVGVPADMAKKKTRVISNNWFPVWDEEFDFPLTVPELALLRIEVREHDKHEKDDFGGQTCLPVSELKSGFRSVPLYDEKDKGMSKSKQTYSVCFCCRRRFKLAVSEAPPEIMDLFQRYSDENGIMTASHLRNFLVEVQRQEKTTEEETQAIIDGHKHLSIFHRRGLNLESFFKYLFSDDNPPLLPSRGVHQDMTLPLSHYYIHTGHNSYLTGNQLSSDCSDVPIINALQRGVRVIELDIWPNASKDNVDVLHGRTLTTPVALIKCLKSIKEHAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTFGDILFCPTSESIKEFPSPESLKRRIIISTKPPKEYLEAKEVKEKEEEPQKGKPSDDEEAWGKEVPSLRGGTITDYKPKGGLEECLKVDPDKVRRLSLSELQLEKAVVTHGKEIVRYRSLFPVGIAGVPSDTNMKKTKTIEDSWLPSWNEVFEFPLTVPELALLRIEVHEYDMSEKDDFGGQTCLPVWELRSGIRAVPLHSRKGDKYNNVKLLMRFEFI. 1564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02097 1563 CDD C2_PLC_like 1005 1127 - -
Seca6g02097 1563 MobiDBLite consensus disorder prediction 1381 1408 - -
Seca6g02097 1563 Pfam C2 domain 476 577 IPR000008 -
Seca6g02097 1563 Pfam C2 domain 1007 1109 IPR000008 -
Seca6g02097 1563 Pfam C2 domain 1474 1536 IPR000008 -
Seca6g02097 1563 CDD C2_PLC_like 1467 1562 - -
Seca6g02097 1563 Gene3D Phosphatidylinositol (PI) phosphodiesterase 687 999 IPR017946 GO:0006629|GO:0008081
Seca6g02097 1563 ProSiteProfiles C2 domain profile. 455 585 IPR000008 -
Seca6g02097 1563 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 690 834 - -
Seca6g02097 1563 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 125 270 - -
Seca6g02097 1563 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 369 455 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Seca6g02097 1563 SUPERFAMILY PLC-like phosphodiesterases 1231 1463 IPR017946 GO:0006629|GO:0008081
Seca6g02097 1563 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 899 985 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Seca6g02097 1563 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 368 454 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Seca6g02097 1563 Gene3D Phosphatidylinositol (PI) phosphodiesterase 121 469 IPR017946 GO:0006629|GO:0008081
Seca6g02097 1563 MobiDBLite consensus disorder prediction 1381 1409 - -
Seca6g02097 1563 FunFam Phosphoinositide phospholipase C 1002 1134 - -
Seca6g02097 1563 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 1231 1375 - -
Seca6g02097 1563 Gene3D - 1146 1225 - -
Seca6g02097 1563 Gene3D - 606 684 - -
Seca6g02097 1563 Gene3D - 35 117 - -
Seca6g02097 1563 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 900 986 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Seca6g02097 1563 CDD C2_PLC_like 474 581 - -
Seca6g02097 1563 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 591 1126 IPR001192 GO:0035556
Seca6g02097 1563 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1007 1134 IPR035892 -
Seca6g02097 1563 FunFam Phosphoinositide phospholipase C 687 1000 - -
Seca6g02097 1563 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1467 1562 IPR035892 -
Seca6g02097 1563 MobiDBLite consensus disorder prediction 841 855 - -
Seca6g02097 1563 SUPERFAMILY EF-hand 588 692 IPR011992 -
Seca6g02097 1563 MobiDBLite consensus disorder prediction 273 294 - -
Seca6g02097 1563 SUPERFAMILY EF-hand 35 127 IPR011992 -
Seca6g02097 1563 ProSiteProfiles C2 domain profile. 1422 1545 IPR000008 -
Seca6g02097 1563 MobiDBLite consensus disorder prediction 269 317 - -
Seca6g02097 1563 Gene3D Phosphatidylinositol (PI) phosphodiesterase 1228 1422 IPR017946 GO:0006629|GO:0008081
Seca6g02097 1563 MobiDBLite consensus disorder prediction 841 864 - -
Seca6g02097 1563 SUPERFAMILY EF-hand 1135 1233 IPR011992 -
Seca6g02097 1563 SMART plcy_3 340 456 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Seca6g02097 1563 SMART plcy_3 871 987 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Seca6g02097 1563 SMART plcx_3 690 834 IPR000909 -
Seca6g02097 1563 SMART plcx_3 1231 1375 IPR000909 -
Seca6g02097 1563 SMART plcx_3 125 270 IPR000909 -
Seca6g02097 1563 SMART C2_3c 476 583 IPR000008 -
Seca6g02097 1563 SMART C2_3c 1429 1543 IPR000008 -
Seca6g02097 1563 SMART C2_3c 1007 1115 IPR000008 -
Seca6g02097 1563 Pfam Phosphatidylinositol-specific phospholipase C, X domain 692 834 IPR000909 -
Seca6g02097 1563 Pfam Phosphatidylinositol-specific phospholipase C, X domain 1233 1375 IPR000909 -
Seca6g02097 1563 Pfam Phosphatidylinositol-specific phospholipase C, X domain 127 270 IPR000909 -
Seca6g02097 1563 ProSiteProfiles C2 domain profile. 988 1117 IPR000008 -
Seca6g02097 1563 Gene3D C2 domain 1456 1563 IPR035892 -
Seca6g02097 1563 Gene3D C2 domain 1002 1139 IPR035892 -
Seca6g02097 1563 Gene3D C2 domain 472 603 IPR035892 -
Seca6g02097 1563 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 476 590 IPR035892 -
Seca6g02097 1563 SUPERFAMILY PLC-like phosphodiesterases 125 457 IPR017946 GO:0006629|GO:0008081
Seca6g02097 1563 PRINTS Phospholipase C signature 925 946 IPR001192 GO:0035556
Seca6g02097 1563 PRINTS Phospholipase C signature 695 713 IPR001192 GO:0035556
Seca6g02097 1563 PRINTS Phospholipase C signature 946 964 IPR001192 GO:0035556
Seca6g02097 1563 PRINTS Phospholipase C signature 721 741 IPR001192 GO:0035556
Seca6g02097 1563 PRINTS Phospholipase C signature 1101 1111 IPR001192 GO:0035556
Seca6g02097 1563 PRINTS Phospholipase C signature 818 835 IPR001192 GO:0035556
Seca6g02097 1563 SUPERFAMILY PLC-like phosphodiesterases 690 988 IPR017946 GO:0006629|GO:0008081
Seca6g02097 1563 CDD PI-PLCc_plant 689 974 - -
Seca6g02097 1563 Pfam Phosphoinositide-specific phospholipase C, efhand-like 609 679 IPR015359 -
Seca6g02097 1563 Pfam Phosphoinositide-specific phospholipase C, efhand-like 1150 1219 IPR015359 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02097 Seca-Chr6 80921968 80949072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02097 16 581 Acyl Lipid Metabolism Gene Families AT2G40116 55.272 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02097 K05857 - gmx:100799027 910.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02095 6 80903761 80916563 Seca6g02097 6 80921968 80949072 ECH
Seca8g01586 8 29443869 29447926 Seca6g02097 6 80921968 80949072 ECH
Seca6g02097 6 80921968 80949072 Seca6g02097 6 80921968 80949072 ECH
Seca6g02095 6 80903761 80916563 Seca6g02097 6 80921968 80949072 PCT