Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02033 ATGGCGAGTTCTTCACGAGGTAACGGAACGATCTCAATTTATAATGATCCCGAAGGACAGTGGCACATTTGTGTCAAAAATGATAGAAATGTGGGCTCTTTTGGCATTTTCTTTGGGGATAGTCCATTCGATTTTGTGCTTCCTGCAACGTTGTTCCAAATGTTCATTGTTACCTTAACCTCTCGAACGCTTTACTTTCTTCTCAGGCCAATAAGAACACCCAAATTCATTTGCAACGTCTTGGGTGGCATTCTTATAGGGCCATCATTTCTGGGGCGCCAAGAGGCATACTGGGAGGCTCTGTTTCCAGTAAGACAGGCAGAGTTTTTAATCTTGATGTCATTACTCGGTGCTGCATATTTTTTGTTCATGATTGCACTGAAAATGGATATACTAATGACTCTAAGAGCAGCCAAAAGTACTTGGAGACTTGGAATTATACCTTTTCTTGCTTCTTTTGGGGTTTTGTCAGCACTCTTACATATTTTTTTTCAACCACAAAACTTGCCTTATAAAAAATTACCAATTGCTCGTGCCGCAATAAGTTCTGCAATGGCAGTTAGTAATTTCCCTGTGGTGTCTGAAGCATTGATTGAACTAAATCTGATAGCCACAGAACTAGGGCAGATTGCTTTGTCATCAGCCATGATGAATGACATCATACAATGGTTAATTATAATAAGCAATCGTTTTCTAGAGGCAAAAGAAATGGAACAAGCAACTATACATTGCGTGTGTTTGTTCTCGTTCATATCTTTTAACATTTTCATTACACGACCTACAATGAAGTTGATTGCTCATAGAACGCCAGTTGGGAAACAAGTGAAGGAAATTTACATTGTGTTCATACTTCTAGGAGTCCTAGTTATGGCTGGTATCAGTGACATGATTGGCGTAACATTTCTTATGGGACCATTGATTTATGGTTTGGTCATACCTAGTGGGCCCCCATTAGGCACAACATTGGTGGAGAAGTCTGAAGCTGTCATGTCAGAGTATTTGCTTCCTTTCTTCTTTGTATATATAGGCATGAACACAAATTTGTCACATCTCCCAAATATGCAAAGGTTTATAACTATGCAGTGTATCTTTTTTGCGGGAGGCTTGGCAAAACTGGTTGCATGTTTGTTGGTTTCTATGACTTACGGAATTAAGGCTAAACATGGCATAGTGCTTGGCCTCATCTTGAACGTCAAGGGCATAACTGAACTTATAGCTTTCGCTAGGCTCAGGAAAATCCATCTGTTGGATGAGAAAACGTTCAATGACTTAGTGTTCTCTGTGGTGGTTATGACCGCAATTGTCACACCCTTAGTTAAATTCTTTTACAGGCATCATCCTCGAGTACTAAACACATCAAGCATATATGAAGGGCAAATAAGAACGATCCAAAACACTCCTAGAAACACAGAGTTTCGCATTATTACATGTGTACAGAGTGAAGGAAATGTGCGTGGCATCACTACCTTGTTGGAAGCTTTTAACCCTATCATAGAAAGCCCTATGTGTGTCTATGTGATACACCTCATCGAGCTCTTAGGGAAAAGTGCACCCATTCTCCTTCCTATAAATTACAAGCAAAACAAAAAGTTCCTCTCTGTTAATTACCCAAACACGAATCACATCATGCGTGCATTTGAGAACTATTCCAACAGCTCTAGTGGTCCAGTTACTATTCTTCCATATGTCAACGTGGCACCTTACAAGAACATGCACAATGCAGTGTGCAACCTTGCCCAAGACAAGATGGTCCCTTTCCTTATCATACCTTTTCATGAAAATGACCATATTGACCTTAACGGCCACGTGGCTACCTCCATTCGCAAACTGAACGCTACATATCAAGCACTTGCGCCATGCACGTTGGGGATACTCGTCGACAGATACTCACAGTTAGGTGCCCATAATGACTCCAAGATGTATTTTCATGTGGGGATTTTCTTTATAGGTGGACCAGATGATAGAGAAGCATTGGCCTTGGGTATTCGAATGTCAGAGAGACCAAATATGAGGGTGTCCTTATTTCGATTCATCTTGATTAACAATAATAAACTATGTAAAAGTAGAATGCAGGTAGAGGAGGAAGATAGCATGTTGGATGAGAGCTTAATTGATGAGTTCAAGGGGAGCAAATTTGGGTGTGGGAATGTTTCTTGGTTTGAAATCATAGTGGATGATGGGGTAGAGATATTGGATGCAATTCGTGGTTTGGAAGGAAACTATGACCTTGTGATGGTAGGCAGGCGCCATAATATTGGATCTTTGAATGATGAGGAAATGGCAATTTTCCTTGAGAATGCCGATAATTTGGGAATATTTGGGGATATGTTGTCATCAACGGATTTTTGTCTTGGGATGGTTCCAGTCTTAGTGACACAATGTGGTGGGGGTGGTGTTCTCCTGGGGCCATCATTTTTGGGACGCCACCGTCTATTAATGGAAATTTTGTTTCCATTGAAACAATCTGCAGTTTTAATAATATTGGCCAAAGTAGGAGCTACATATTTTGTGTTCATCAATGCATTGAAAATGGATGTAATCACGTCTTTAAGAGCAGCGAAACATAGTTGGCGATTTGGTGTAATTCCATTTTTCGCTTCTTATTTGGTTACAATAACCCTCATGATTTTATACAGGCAAAATCTTCAAGGTATAACAGGTCCCGCATATTCGATTCCGAATGTATTCACCGTAAGTAGTTTCGCTGTTGTTTCTGAAGCCTTGACAGAACTCAACCTTATTACTACGGAACTAGGACAAATTGCTCTGTCTTCAGCCATGATCAGTGAAATAATGCAATGGGCTACTATAACACTCCAATTCAACTCAGAAGGGGACTTTATATATTCAGTTGGATTTATGGCTTGTACCTCCATATTCATTGTATTGTTATTTGTGCTTATTCAACCAGCGATGAAGAGTATTGCTCGAAGAACACCAGTAGGGAAACCAGTAAATGAAATGTATATCGTCATGATACTTCTCGGCGTCTTAATTATGGCTACGGTTGGCGATACCATTGGCTTGAATTTCATTGTAGGGCCCACACTTTTTGGTTTGGTTATGCCAAATGGACCTCCCTTGGCAACAACAATTATAGAGAGAAGCGAACTTATCATCTCAGAATTTCTTATGCCTTTCTTCTTCATAAATGTAGGAATTACCACAAATTTTGTTGGAATTCATAACCACTGGAAGGGTTCTGTAATTTTCCTGGGTATCTTATTTCTGGGATTCTTGGCAAAGATCATTTCATGCGTGCTCATAGCTCCTTCATGCAATATAAGGCTAAAACACGGTGTGGTGCTTGGGCTCATACTAAACATCAAGGGAATAGTCGAGCTCATATATTTTTCTAGAATCAAAAAAGCTGTGCTTATTAATGAAGAAATATATAGTCAAATGGTGCTCTATGTCGTGGTGATTACCTCAGTTTGCATACCCTTGATCAGAAACATGTATAAGCATCGCTCTCGTGTTTTGGCAACACCAAGCATACATGAAAGACGTGTAAGGACGATCCAAAGCAGTCCTGAAAACACAGAGTTCAATATCATTTCTTGTTTACACAATGATGCAAATGTGCATAGCATGATTGCCATGCTTGAGATATGTAACCCAACCATAGAAAGCCCCATATGTGTCCATGTGATCCATTTCATTGAGCTATTAGGGAAAAGCACACCTATTCTTCTTCCTATGAACATCCAGAATAAGAAATCCCCCCTCTCTATCAATTACCCTAACACAAATCACATTTTGCGTGCCTTTGAGAACTACTCCAAAAACTCCCAAGGCCCTGTCACCATTTTTCCATATGTTAATGTGGCCCCTTATAATAGCATGCATGAGGCCATTTGTAACCTCGCTGAAGACAAGTCAGTACATTTCCTTATTATCCCATTTCATGAAAATGATCAAAGCTTCGGTAGCCACATTGGTACCTCCATTCGCAACCTCAACTCTAGCTTTCAAGCAACGGCAAGTTGCACAGTGGGAATACTTGTGGACAGATACTCACAACTAAGTATGAGCACCTCCAAGTTATATTTTCATGTAGGCATCTTCTTTCTAGGTGGACCAGATGATAGAGAAGCACTAGCATTGATCATTCGAATGATGGATCGCACGAATATGAAAGTTACCTTGTTCAAGTTTGTCATGAATAACAACAATTCAAGTGTTGCTATAGATAAAATATTGAAAGGAAATGAAGAAGAGGAAAGTTTTGAGAACACCTTGGATGAAAGTTTGATAGATGAGTTCAAGGCAAAGAAAATTAATAAGGATGATGTTATTTGCCATGAGATATTGGTGGATGACTGCATACAAGTGTTGGAAGCTATTCGAGGTCTAGAGAGCAATGATTATGACCTTGTGATGGTGGGTAAGAGACATAACATGGGGGATTTGACAGATGAAGAAATGTCAAATTTCATGGACAATGCAAAGCAGTTGGGAATTTTCGGTGATATGTTGGCATCCACAGAGTTTTGTAATGGGAGAGCTTCAGTCTTGGTGATGCAATGTGGTGAGAAACGAGTAAACTATTTTGAGTAG 4560 0.3982 MASSSRGNGTISIYNDPEGQWHICVKNDRNVGSFGIFFGDSPFDFVLPATLFQMFIVTLTSRTLYFLLRPIRTPKFICNVLGGILIGPSFLGRQEAYWEALFPVRQAEFLILMSLLGAAYFLFMIALKMDILMTLRAAKSTWRLGIIPFLASFGVLSALLHIFFQPQNLPYKKLPIARAAISSAMAVSNFPVVSEALIELNLIATELGQIALSSAMMNDIIQWLIIISNRFLEAKEMEQATIHCVCLFSFISFNIFITRPTMKLIAHRTPVGKQVKEIYIVFILLGVLVMAGISDMIGVTFLMGPLIYGLVIPSGPPLGTTLVEKSEAVMSEYLLPFFFVYIGMNTNLSHLPNMQRFITMQCIFFAGGLAKLVACLLVSMTYGIKAKHGIVLGLILNVKGITELIAFARLRKIHLLDEKTFNDLVFSVVVMTAIVTPLVKFFYRHHPRVLNTSSIYEGQIRTIQNTPRNTEFRIITCVQSEGNVRGITTLLEAFNPIIESPMCVYVIHLIELLGKSAPILLPINYKQNKKFLSVNYPNTNHIMRAFENYSNSSSGPVTILPYVNVAPYKNMHNAVCNLAQDKMVPFLIIPFHENDHIDLNGHVATSIRKLNATYQALAPCTLGILVDRYSQLGAHNDSKMYFHVGIFFIGGPDDREALALGIRMSERPNMRVSLFRFILINNNKLCKSRMQVEEEDSMLDESLIDEFKGSKFGCGNVSWFEIIVDDGVEILDAIRGLEGNYDLVMVGRRHNIGSLNDEEMAIFLENADNLGIFGDMLSSTDFCLGMVPVLVTQCGGGGVLLGPSFLGRHRLLMEILFPLKQSAVLIILAKVGATYFVFINALKMDVITSLRAAKHSWRFGVIPFFASYLVTITLMILYRQNLQGITGPAYSIPNVFTVSSFAVVSEALTELNLITTELGQIALSSAMISEIMQWATITLQFNSEGDFIYSVGFMACTSIFIVLLFVLIQPAMKSIARRTPVGKPVNEMYIVMILLGVLIMATVGDTIGLNFIVGPTLFGLVMPNGPPLATTIIERSELIISEFLMPFFFINVGITTNFVGIHNHWKGSVIFLGILFLGFLAKIISCVLIAPSCNIRLKHGVVLGLILNIKGIVELIYFSRIKKAVLINEEIYSQMVLYVVVITSVCIPLIRNMYKHRSRVLATPSIHERRVRTIQSSPENTEFNIISCLHNDANVHSMIAMLEICNPTIESPICVHVIHFIELLGKSTPILLPMNIQNKKSPLSINYPNTNHILRAFENYSKNSQGPVTIFPYVNVAPYNSMHEAICNLAEDKSVHFLIIPFHENDQSFGSHIGTSIRNLNSSFQATASCTVGILVDRYSQLSMSTSKLYFHVGIFFLGGPDDREALALIIRMMDRTNMKVTLFKFVMNNNNSSVAIDKILKGNEEEESFENTLDESLIDEFKAKKINKDDVICHEILVDDCIQVLEAIRGLESNDYDLVMVGKRHNMGDLTDEEMSNFMDNAKQLGIFGDMLASTEFCNGRASVLVMQCGEKRVNYFE. 1520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02033 1519 FunFam Cation/H(+) antiporter 15 49 449 - -
Seca6g02033 1519 PANTHER CATION/H + ANTIPORTER 30 793 - -
Seca6g02033 1519 Gene3D - 788 1162 IPR038770 -
Seca6g02033 1519 Gene3D - 48 449 IPR038770 -
Seca6g02033 1519 Pfam Sodium/hydrogen exchanger family 798 1145 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca6g02033 1519 Pfam Sodium/hydrogen exchanger family 55 439 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02033 Seca-Chr6 79655326 79664929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02033 35 793 Antiporter Super Family AT2G13620 33.634 1.36e-133 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02033 - - gmx:106794183 1092.41