Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02018 ATGGAATCTGGAAACAAGACATTATTATGCCAAGATCCTCACAGCCATTATCACAACAGTATCTGGAGCTCAGGCAACCCACTCCAATCCCCCTCATCTCTTTTCTTTATGCAGGTGTCTTTGATTACCATAGCCACACAGTTCTTCGATTTTTGTCTCAGGCCACTAGGACAATCCTCCCTTGTATCCTATATTCTTGGTGGAGTGCTATTTGGTCCATCAATTCTGGGGCATAATAAGATGCTGGCACATACCTTGTTCCCTATGAGAGGTTCTTTGGTGCTTGAGACAATTGCAACATTTTTCCTCATGTTCTTCTACTTCATATGTTGTATGAAGATGGATCCTGCCACAATGCTGAAGACAGAAAAGCAGGCCATCACAATTGGTCTTTCTGTATTCCTATTTACATTGGTAATCCCTACTGGATTGGCCTTTCTGTTGAGGCAATATGTTTCCATGGACAAGAGCCTCTCAGAGGCTCTTCCTTTTATAGCTACCTCACAATCCTTAACTGTGTTTGTTAGCATAGTAGTCTTGCTGACAGAGCTCAGAATCCTTAACACTGACATAGGCCGTCTAGCCATGTCAGCATCAATGTTTGTTGATGTTATAAGCTTTCCTATGACAGTGCTTATGTTTGCTATAATGCAGACTGTGAATATTGGTGGTAATATTGTGACACTACTATGGATCCTTCTATCCATAGTAGGACTCTTGATTGTTATTGTATATGTAATGAGGCCAACAATACTATGGATCGTAGAGCACTCAGATGGCAAGCGTGTTGATGATTTCTGCATTTGTTGTATCTTTGTCTTCATTCTCTTTACTGGATTTTTCAGTGAATTTATTGGTCAACATTTTGCTATGGGACCAATACTTTTAGGCCTGGTTGTTCCAGAAGGGCCACCTATAGGAACAACTTTGCAAACTAAACTGGAGACAATCTGTGAGGCATTTCTGTATCCAATCTACCTTGCTGTTAGTGGACTGCAAACTGATATCTTCAAAGTCAACATCCAATCCATGTGGATTGTGGGTCTTGTAATTATAGTTGCTTTCCTGGTAAAGATTGGTGCTGTGATGTTACCAGGATACTATTTCAATGTTCCCATGAAAGATTGTTGTGTGATTGGGCTTCTTCTAAATGGAAGAGGCATTGCAGAGATTACCATTTACAATTGCTTGAAGGGAAGCAAGCAACTATCTGAACAAGAGTTCACTTTGATGATGGTCTCCATTCTAGCAATTAATGCTATTATAACACCACTGATAAAATTCTTATATGATCCTTCAGAACAATATCATACTGGAAGAAGATCTTCAATTCAACATACAAAGCGAGATTCTGAGCTCAGAGTCATGGTCTGTGTTTATGAAAATGAAAACATCCCTACAATCCTCAACATTTTAGAAGCATCCTATGCAAGCAGTGAGAGCACTGTTGCAGTTATAGCACTAGTCCTAGTAGAGCTTCTTGGAAGAGCCAGGCCTATTCTCATTTCTCACCAACCCCAAGATCTAGTGAGGTCAAACTCATTCAATTATTCAACACAAATTGACAATGCATTGAGGCAATATGCACAGGTGAATGAAGGGTATGCAACAGTTCAGTCTTTCACTTCAATCTCTGACTTTAACACAATACATGATGATATTTGCCGAATAGCACTTGACAGAAGAGCCAACATTTTGATCATACCTTTTCACAAGAGATGGGAAATAGATGGTTCTGTGGAGGTAACCAATAGGGGAATCCAAACCATGAACCTTAAAGTCCTTGAAAGGGAACCTTGCTCAGTGGCAATTCTCATTGATAGAGGTGTATTGAGTAGTTCTCCATCACTTTTACTTGCAAGATCAATGTACTATGTTGCTGTGTTTTTCATTGGGGGTGCAGATGATGCAGAGGCACTAGCCTATGGTAGTAGGATGGCTAGGCATGAGTGTGTTAGTGTGTCAGTGGTTAGGTTCCTTCTATTTGGAGAAGAGAATTCTAAAGACAGAAAACGTGACAGTGATCTTGTAGATGAATATAGATATTATAATGCTGGGAATCGTAGGTTTGAGATAATGGATGAAGTAGTAAAAGATGGAATAGAGATGTCTTCACGAATCACAAAATTGAGAGATTATTTTGATTTAGTAATGGTAGGGAGGGAGCATCCACAGTCTGCTTTGCTTCATGGACATGATCAATGGAGTGAGTGTCCTGAGTTAGGGGTCATTGGGGATATGCTAGCTTCACAGGATCTTGTGACAAAGGCTTCGGTGTTGGTGGTGCAACAACAGAGAGTAGGAGGGAGGCTTGTTAAACATACTATGAATCCATTACCAAATCAAAGAGATCAGCTGGTGTTGCCAGAGGAGGCAGATATACTCTGCACGCACCCAATGTTTGGACCTGTGAGTGGGAAGGATGGATGGAAAGAGCTGACTTTCATGTATGAGAAAGTTCGAATACGAGATGAACCTACCTGCTCTAAATTTCTCAGAATTTTTGCATCTGAGGGTTGCAAGATGGTAGAAATGACCTGTGAGGAACATGATAAAGCAGCTGCCAAGAGCCAATTTATCACACACACAATAGGCAGGACATTAGCAGAAATGGATATTAAGTCCACAGCTATTGACACCAAGGGCTTTGAAACACTTGTTCAATTGAAGGAGACCGTCAAGGGATGTAGTTTTGATCTGTATAGTGGATTATTCTTGCATAACATATTCGCCAGACAAGAGCTGGAAAACCTTGAACATGCCTTGTACAAAGTCAAAGAGATGCTGGTTCAAAGGATGCATGAGGAGCAGGGTCCATAA 2820 0.4067 MESGNKTLLCQDPHSHYHNSIWSSGNPLQSPSSLFFMQVSLITIATQFFDFCLRPLGQSSLVSYILGGVLFGPSILGHNKMLAHTLFPMRGSLVLETIATFFLMFFYFICCMKMDPATMLKTEKQAITIGLSVFLFTLVIPTGLAFLLRQYVSMDKSLSEALPFIATSQSLTVFVSIVVLLTELRILNTDIGRLAMSASMFVDVISFPMTVLMFAIMQTVNIGGNIVTLLWILLSIVGLLIVIVYVMRPTILWIVEHSDGKRVDDFCICCIFVFILFTGFFSEFIGQHFAMGPILLGLVVPEGPPIGTTLQTKLETICEAFLYPIYLAVSGLQTDIFKVNIQSMWIVGLVIIVAFLVKIGAVMLPGYYFNVPMKDCCVIGLLLNGRGIAEITIYNCLKGSKQLSEQEFTLMMVSILAINAIITPLIKFLYDPSEQYHTGRRSSIQHTKRDSELRVMVCVYENENIPTILNILEASYASSESTVAVIALVLVELLGRARPILISHQPQDLVRSNSFNYSTQIDNALRQYAQVNEGYATVQSFTSISDFNTIHDDICRIALDRRANILIIPFHKRWEIDGSVEVTNRGIQTMNLKVLEREPCSVAILIDRGVLSSSPSLLLARSMYYVAVFFIGGADDAEALAYGSRMARHECVSVSVVRFLLFGEENSKDRKRDSDLVDEYRYYNAGNRRFEIMDEVVKDGIEMSSRITKLRDYFDLVMVGREHPQSALLHGHDQWSECPELGVIGDMLASQDLVTKASVLVVQQQRVGGRLVKHTMNPLPNQRDQLVLPEEADILCTHPMFGPVSGKDGWKELTFMYEKVRIRDEPTCSKFLRIFASEGCKMVEMTCEEHDKAAAKSQFITHTIGRTLAEMDIKSTAIDTKGFETLVQLKETVKGCSFDLYSGLFLHNIFARQELENLEHALYKVKEMLVQRMHEEQGP. 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02018 939 Gene3D - 753 851 - -
Seca6g02018 939 Gene3D - 33 438 IPR038770 -
Seca6g02018 939 Pfam Sodium/hydrogen exchanger family 47 422 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca6g02018 939 PANTHER CATION/H + ANTIPORTER 9 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02018 Seca-Chr6 79402151 79409398 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02018 3 764 Antiporter Super Family AT2G13620 36.122 1.20e-157 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02018 K26731 - gmx:100779700 1071.23