Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02009 ATGTCTCCGACGCCGGGATTCAACGTCCCACTCTTGCCGGAATCCAAAGCATCGGCGCATGAGCCGGCCTCCGTCTCCGGCGCCGTCTTCAACGTCGCCACGAGCATAGTCGGCGCCGGGATCATGTCAATTCCGGCAATCCTGAAGGTTCTCGGCGTGATTCCAGCTTTCGCCATGATTCTGATTGTGGCCGTGCTGGCAGAAGTTTCCGTGGACTTCCTCATGCGGTTCACGCATTCCGGTGAAACGACGACGTACGCTGGAGTCATGAGGGAGGCGTTTGGGCCACCAGGAGCACTAGCGGCTCAAGTTTGCGTCATAATCACCAACCTTGGGGGTTTAATTCTCTACCTAATTATCATCGGGGATGTGCTCTCTGGGAAGCAAAGTGGAGGTGAAGTGCACTTGGGAATTTTGCAACAGTGGTTTGGATTTCACTGGTGGACTTCACGGGAATTTGCTCTGTTTTTCACTTTGGTCTTCGTTATGCTTCCATTGGTCTTCTACCGTCGTGTAGAGTCCTTGAAGTACAGCTCTGCAATATCAACTCTTCTTGCAGTGGCATTTGTTGCAATATGCTCTGGGTTGGCTATTGTTGCTTTGGTGCAAGGGAAAACACAAACTCCTAGATTGTTTCCTCAGTTTGACTACCAAACCTCATTCTTTGATTTGTTCACTGCAGTTCCTGTTGTAGTCACAGCCTTCACATTTCATTTTAATGTGCATCCGATTGGGTTTGAGCTTGCCAAGCCATCTGATATGACAACAGCTGTTCGATTAGCATTATTGCTTTGTGCTGTTATTTACTCTACAATAGGTCTATTTGGGTACCTGTTATTTGGGGATTCAACCCAATCAGATATTCTTATCAATTTTGATCAGAATACTGATTCTGCAGTTGCTTCGTTTTTCAATAGTTTAATCCGTGTAAGCTATGCACTCCATATCATGCTGGTATTCCCTCTAGTGAACTTCTCTTTGAGAGCCAACATAGATGAATTACTCTTCTCCAAGAAGCCTCTGCTAGCCACCGACAACAAAAGATTTGTGATCCTTTCCCTGGTGTTGCTAGTCTTTTCCTACCTTGCAGCTATAGCAATCCCAGATATTTGGTACTTCTTTCAATTTCTGGGATCAACATCTGCAGTGTGCCTTGCTTTCATTTTCCCTGGCATTATTGTTTTAAGGGATGCTCCAGGTATATCATCAAGAAGGGAAAAAATTGTAGCATTGATTATGATTATACTAGCTGTAGTTACTAGTGTGATTGCCATTTCCACCAACATATACAATGCTTTAAGTAGCAAGTCATAA 1314 0.4498 MSPTPGFNVPLLPESKASAHEPASVSGAVFNVATSIVGAGIMSIPAILKVLGVIPAFAMILIVAVLAEVSVDFLMRFTHSGETTTYAGVMREAFGPPGALAAQVCVIITNLGGLILYLIIIGDVLSGKQSGGEVHLGILQQWFGFHWWTSREFALFFTLVFVMLPLVFYRRVESLKYSSAISTLLAVAFVAICSGLAIVALVQGKTQTPRLFPQFDYQTSFFDLFTAVPVVVTAFTFHFNVHPIGFELAKPSDMTTAVRLALLLCAVIYSTIGLFGYLLFGDSTQSDILINFDQNTDSAVASFFNSLIRVSYALHIMLVFPLVNFSLRANIDELLFSKKPLLATDNKRFVILSLVLLVFSYLAAIAIPDIWYFFQFLGSTSAVCLAFIFPGIIVLRDAPGISSRREKIVALIMIILAVVTSVIAISTNIYNALSSKS. 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02009 437 PANTHER AMINO ACID TRANSPORTER 14 420 - -
Seca6g02009 437 Pfam Transmembrane amino acid transporter protein 23 424 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02009 Seca-Chr6 79164540 79166348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02009 4 431 Amino Acid or Auxin Permease AAAP Family AT3G56200 59.535 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02009 - - gmx:100813056 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02009 6 79164540 79166348 Seca6g02009 6 79164540 79166348 ECH
Seca8g00824 8 10965509 10969426 Seca6g02009 6 79164540 79166348 PCT