LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca6g02003	ATGGCATTTGAAGTAAGAGATGGTGTTGGTGATTGGCCCTTAGAGTTTTTTAAAGATTGTGCTTCTACAAGTAAAATTGATGGAAATACAATTTCTTTTCAAGAGACACAACAAGAACCATTGCCTCAAGCCAATCCCTTTTATGATGAAGTTCCTTATGAAGGGCAAATGTTTAATAGTTCTGATGAAGCTTGTGAATCTCACTATGCATTTGCACGAAAAAATGGCTTTTCGATTAGACGTGACCATACTTACAAATCTAGTAAGAATGAGTCTGAGGATAATCCTTTGGGTACTTATAAAAGAGAGTTTGTTTGTCATCGTGCTGGTTTTGTTAAACAACGCAAAGTTATTGAAGAGGAAAGTCAAAGAAAACGGAAAAGTTCAAGATGTAATTGTGGTGCAAAAATGTTGATTAACAAAAAGACAATTGGCTTTGAGGAAAAATGGGTGGTTAAATATTTTTATAATAACCACAACCATGAGTTATTGGATGATAAAGAGGTTCAATTTTTTCTAGCTTATCGAAACATCTCAATTGTTAATAAAGATCGTATACCATTATTGTCAAAAGATGGTTGCCCTGTAAGCCTCATAATAAGAGTACTTGAGTTAGAGAAAGGAATAGATCCAAGAAATCTACCATATTTAGAGAAGGATAGTGGTATTGGTAAAGAAAATGATGCTTCAGATGTTCTTAAATTGTGCAAAAGTTTGAAAGATAGAGACGATGCCTTCCAATATGATTTCACCCTAGATGAAAATAACAAATTGGAGCATATTATTTGGGCATTTGGTGATTCAATTCGAGCATATGAGATTTTTGGAGATTTGGTTGTTTTTGATACCACATATCGAATAAATCGTTATGATATGTCTCTTGGATTATGGGTTGGGGTTGATAATCATGGGAATTCAATTTTTTCGGTTGTGTTCTATTGCGAAATGAGAAGCTTTCTTCCTTCACATGGGCTATAA	978	0.3384	MAFEVRDGVGDWPLEFFKDCASTSKIDGNTISFQETQQEPLPQANPFYDEVPYEGQMFNSSDEACESHYAFARKNGFSIRRDHTYKSSKNESEDNPLGTYKREFVCHRAGFVKQRKVIEEESQRKRKSSRCNCGAKMLINKKTIGFEEKWVVKYFYNNHNHELLDDKEVQFFLAYRNISIVNKDRIPLLSKDGCPVSLIIRVLELEKGIDPRNLPYLEKDSGIGKENDASDVLKLCKSLKDRDDAFQYDFTLDENNKLEHIIWAFGDSIRAYEIFGDLVVFDTTYRINRYDMSLGLWVGVDNHGNSIFSVVFYCEMRSFLPSHGL.	326

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca6g02003	325	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	46	308	IPR031052	GO:0006355
	Seca6g02003	325	Pfam	FAR1 DNA-binding domain	70	164	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca6g02003	Seca-Chr6	79098050	79099051	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Seca6g02003		FAR1	5.1e-17	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca6g02003	-		-	ccaj:109802755	533.487