Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01993 ATGTTTCAATTCACTAGAGTATGTTTAATAACAGGTGCACATACTATAGGCCTGGCTAGATGCGTACAATTCCGAGCACACATCTACAATGATTCCAACATTGATGCCTCCTTTGCCAAGTCCCTACAAGGCAAGTGCCCCAGAAGTGGAAGTGACAATATTCTGGCACCCCTTGACCATCAAACTCCGACCCATTTCGATAATCTCTACTTCAAGAATTTACTGGATAAAAAGGCTCTTCTCCATTCTGACCAGGAGCTGTTCAATGGCAGTTCTACTGACAATCTGGTGAAAAAATATGCTACTAATACAGCTGCATTCTTTAAAGCCTTTGCCAAGGCCATGGTCAAAATGAGCCGGATCAAGCCTCTCACAGGAAGCCAAGGGCAGATCAGAATCAATTGCAGAAAAGTCAATTGA 420 0.431 MFQFTRVCLITGAHTIGLARCVQFRAHIYNDSNIDASFAKSLQGKCPRSGSDNILAPLDHQTPTHFDNLYFKNLLDKKALLHSDQELFNGSSTDNLVKKYATNTAAFFKAFAKAMVKMSRIKPLTGSQGQIRINCRKVN. 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01993 139 FunFam Peroxidase 2 118 - -
Seca6g01993 139 Gene3D - 119 139 - -
Seca6g01993 139 PRINTS Plant peroxidase signature 73 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g01993 139 PRINTS Plant peroxidase signature 57 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g01993 139 PRINTS Plant peroxidase signature 113 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g01993 139 PRINTS Plant peroxidase signature 5 17 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g01993 139 ProSiteProfiles Plant heme peroxidase family profile. 7 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g01993 139 SUPERFAMILY Heme-dependent peroxidases 7 139 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca6g01993 139 Gene3D Peroxidase, domain 2 5 118 - -
Seca6g01993 139 PRINTS Haem peroxidase superfamily signature 6 21 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g01993 139 PRINTS Haem peroxidase superfamily signature 59 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g01993 139 PANTHER PEROXIDASE 72-RELATED 7 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g01993 139 Pfam Peroxidase 7 103 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01993 Seca-Chr6 78943578 78943997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01993 10 139 Peroxidase AT5G05340 56.061 1.47e-46 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01993 K00430 - gmx:100777039 209.92