Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01973 ATGAAGAGGAATGATAATGGCGGTGGTGGTGAGTTGGTGGCGGAGATGCATGCGGCGAAAACGTGGGTGACGATGTGGGTGTTTGCATCAATCCTTCCACTGGCTTTGGCTCATACAATGGGGAACCTGTTAACTAACATTAGTCTTGGCAAGGTTGTTGTATCTTTCACTCTCACAATCAAAGCTATGGAGCCTTTTTTCACTGTTGTTCTTTCTACCCTTTTTCTGGGTGAGGAATTGCCAAATTCCTTGAGGAAGCTCACAAAAAAAACTAGGACCCTGAGTGATAAACCGTTTGAGGTTGGTGTCATTCTAGTGTTTCCTTGTGAGGAGAGCTTGAAGGTCGAAAATGCCAATGCTTCAAAACAAGCAATTGATGCAAGTGTCGATGGAATAATTGTTCTAGGACGTGAAGTTGGTGGTCATTTCATTAGTCAGGGGTATTAA 447 0.4362 MKRNDNGGGGELVAEMHAAKTWVTMWVFASILPLALAHTMGNLLTNISLGKVVVSFTLTIKAMEPFFTVVLSTLFLGEELPNSLRKLTKKTRTLSDKPFEVGVILVFPCEESLKVENANASKQAIDASVDGIIVLGREVGGHFISQGY. 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01973 148 Pfam Triose-phosphate Transporter family 23 82 IPR004853 -
Seca6g01973 148 PANTHER SOLUTE CARRIER FAMILY 35 17 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01973 Seca-Chr6 78570710 78574588 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01973 28 79 Antiporters AT5G33320 73.077 4.17e-19 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01973 K15283 - bvg:104891024 89.3521