Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01952 ATGAATATTGACACCGCGGGAATAACTTCTTTGGTGGAGCTGAATAAGAATCTGACATCACATGGAGTGAGGTTAGCCATCGCTAACCCTAGGTGGCAAGTAATTCACAAGCTAAGATTAGCTAACTTTGTAAGCAAAATTGGAGGAAGGGTTTTCCTGTCTGTGGCAGAAGCTGTAGATGGAATGATTGGTGCTAAAATGGCTACTGTATAA 213 0.4178 MNIDTAGITSLVELNKNLTSHGVRLAIANPRWQVIHKLRLANFVSKIGGRVFLSVAEAVDGMIGAKMATV. 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01952 70 Gene3D STAS domain 1 63 IPR036513 -
Seca6g01952 70 SUPERFAMILY SpoIIaa-like 3 60 IPR036513 -
Seca6g01952 70 ProSiteProfiles STAS domain profile. 1 62 IPR002645 -
Seca6g01952 70 Pfam STAS domain 2 58 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01952 Seca-Chr6 77859829 77860157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01952 1 67 Inorganic Solute Cotransporters AT5G10180 53.731 2.55e-21 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01952 K17469 - gmx:100817841 111.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01952 6 77859829 77860157 Seca6g01952 6 77859829 77860157 ECH