Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01945 ATGGTGGTGATCAATGAAGAAATCGACCCCTATGTACAAGAACTAGAATCTGATGAGGACACAGCAGCTGAAAACATTGACTATGACCAGCTCAAGAAGCGCATGTGGAAGGATCGGATCCTTCTTCAGAAGCTGAAGGAAAAACGTGAGCAAAATGAGCCAGAGGAACAAGCAAAACAAGAGGCATCAAGAAGGAAGAAGATGTCAAGAGCACAAGATTCAGTCCTCAAGTACATGGTGAAGATCATGGAGGTTTGCAATGCTCAAGGTTTTGTATATGGGATTATCCCAGAGAAAGGAAAACCAGTCTCTGGTTCCTCTGAAAGCTTAAGAGGTTGGTGGAAAGATCAAATCCGTTTTGATCAACATGCCCCTGTTGCACTTGCCAAAATCTTGCCACTCTTTGAAAAAGATGAGAATTTGGATCCAACTTCCTACATACACCTCCTTCAAGACTTGCAAGATTCCACACTTGGCTCTCTCCTTTCTGCTCTCATGCAACACTGTATCCCTCCACAGAGAAGGTTCCCTTTAGAGAGGGGAATATCTCCCCCTTGGTGGCCCACAGGGGATGAAATTTGGTGGGGTGAGCAAGGACTATTGGCTCAAGAACAAGGTCCACCTCCTTATAAGAAGCCCCATGATCTCAAAAAGGCTTGGAAAGTGTCTGTTTTGGCTGCAGTCATCAAACACATGTCTCCTGATTTGGAGAAACTTAGAAGGTTGGTTACTCAATCCAAGACCTTGCAAGATAAGATGACAGCTAAAGACACTGCAACTTGGTCCAAAGTCATGAACCAAGAAGAAGCCTTGTTACAACTAACTAACAAGTGTCTCAAAATATCTCCATCAGAGGAAGATGAAAAAGAGGAGGAGGAAGGTGAATGCTCTGCTCCTGTTTTGAATGTTGTGGATGTGGATGAATCAGTTTCAGGTAGTAGTAGTAAAAGTGAGAAAAGGAAGTGTGAGTTTGAATTTGGTGATGCTGAAGATAAGCTATATGCTTGTCAAAACACAGTGTGTCCACAGAGTGAATTATCTATGGGATTTACTGATAAAAACTTGAGGATGGACCATGAATCTCTTTGTGTTTACCGTACTGAGGGAAGCAATGTTCTCTTGGATGAGAATATCTCGAATGATGCACCAATCACAGGTTTAGATGATTGTTTTAATATGGAGTTAGCAAAGGCTAATCAGAATGATGTGGGGGATATTGAAGGTGGGACATTGGAATACAACTTAGCCAACTGGCTGAATGGCATTGAAGACCATGAATTGCTAGCAGCATTGGAAATGGCTAAAGGTAACATGGACTTGACTGAAAATCCAGTGCAGATCCCACAAGGCCAAGAGGAAGCAACCTCAATTTGGGACTTTGCATACCATCCAGCTCAACAGTAG 1404 0.4281 MVVINEEIDPYVQELESDEDTAAENIDYDQLKKRMWKDRILLQKLKEKREQNEPEEQAKQEASRRKKMSRAQDSVLKYMVKIMEVCNAQGFVYGIIPEKGKPVSGSSESLRGWWKDQIRFDQHAPVALAKILPLFEKDENLDPTSYIHLLQDLQDSTLGSLLSALMQHCIPPQRRFPLERGISPPWWPTGDEIWWGEQGLLAQEQGPPPYKKPHDLKKAWKVSVLAAVIKHMSPDLEKLRRLVTQSKTLQDKMTAKDTATWSKVMNQEEALLQLTNKCLKISPSEEDEKEEEEGECSAPVLNVVDVDESVSGSSSKSEKRKCEFEFGDAEDKLYACQNTVCPQSELSMGFTDKNLRMDHESLCVYRTEGSNVLLDENISNDAPITGLDDCFNMELAKANQNDVGDIEGGTLEYNLANWLNGIEDHELLAALEMAKGNMDLTENPVQIPQGQEEATSIWDFAYHPAQQ. 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01945 467 MobiDBLite consensus disorder prediction 46 68 - -
Seca6g01945 467 SUPERFAMILY DNA-binding domain of EIN3-like 147 272 IPR023278 GO:0003700|GO:0005634
Seca6g01945 467 Coils Coil 45 65 - -
Seca6g01945 467 Pfam Ethylene insensitive 3 30 269 IPR047091 GO:0003700
Seca6g01945 467 Gene3D - 141 278 IPR023278 GO:0003700|GO:0005634
Seca6g01945 467 Gene3D - 57 140 IPR023278 GO:0003700|GO:0005634
Seca6g01945 467 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 13 372 IPR006957 GO:0003700|GO:0005634
Seca6g01945 467 FunFam Ethylene insensitive 3-like 1 141 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01945 Seca-Chr6 77702585 77703988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01945 23 461 EIL Transcription Factor Family AT5G65100 44.762 6.81e-136 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Seca6g01945 EIN3 1.3e-114 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01945 K14514 - gmx:100817300 591.267