Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01917 ATGTGCGGGATCCTTGCAGTGCTCGGTTGCGTCGATAACTCTCAGGCCAAGCGCGCTCGCATCATCGAGTTGTCTCGCAGGTTACGGCATAGAGGTCCTGATTGGAGTGGCATACACTGTCATGAGGATTGTTACCTTGCTCATCAACGGCTTGCTATTGTTGATCCTACTTCAGGGGATCAACCTTTGTACAACGAAGAAAAGACTGTTTTTGTCACTGTAAATGGGGAGATATACAATCATAAGCAATTGAGACAGAAACTGGATTCCCATCAATTTCGAACTGGTAGTGATTGTGAAGTGATTGCCCATCTTTATGAAGAATATGGAGAAGAATTTGTGGATATGCTGGATGGGATGTTCTCCTTTGTCCTTATTGATACTAGAGATAAAAGTTTTATTGCTGCTCGTGATGCAATTGGCATTACCCCTCTTTACTTGGGCTTTGGTCATGATGGATCAACATGGTTTGCTTCTGAAATGAAAGCTCTGATTGACGATTGTGAGAGATTCATATCTTTTCCTCCGGGGTATATATATTCCAGCAAACAGGGGGGATTAAGAAGGTGGTACAATCCACCATGGTACTCAGAGCATATTCCATCAACACCCTATGATCCAATAATTTTGCGTGAAGCCTTTGAGAGGGCTGTATTTAAGAGAATGATGACTGATGTACCTTTTGGAGTTCTTTTATCTGGAGGACTAGACTCATCCCTTGTTGCTGCTGTGGCCAATCGATATTTGGCTAAATCTGAAGCTGCTCGTCAGTGGGGATCACAGCTACATACTTTCTGCATTGGTTTGAAGGGCTCTCCGGATTTGAGAGCTGCAAAAGAGGTAGCAGATTATCTTGGTACTCGTCACTACGAGCTTAATTTCACGGTTCAGGAAGGTATAGATGCACTTGAAGAAGTCATTTACCATATTGAAACATATGATGTAACGACTATCAGAGCAAGTACTCCAATGTTTCTTATGTCCAGAAAAATTAAAGCCTTGGGAGTGAAAATGGTTCTTTCTGGAGAAGGTTCAGATGAAATATTTGGAGGTTACCTATATTTCCATAAGGCACCTAACAAGGAAGAGTTTCACGAAGAAACATGTAGAAAAATTAAAGCTCTTCATCTTTATGACTGCCTTAGAGCCAATAAATCAACTTCAGCATGGGGTGTAGAGGCAAGAGTACCATTCTTGGATAAAGATTTTATCAACATAGCCATGAGTATGGATCCAGAATGGAAAATGATAAAGCCTGATCTTGGAAGGATAGAGAAGTGGGTATTACGCAATGCATTTGATGATGATAAGAATCCATATTTACCAAAGCACATATTGTATAGGCAGAAGGAACAGTTCAGTGATGGTGTCGGGTACAGCTGGATTGATGGCTTGAAGGATCATGCTAACAAACAAGTAGGCTCTCTAACTTGTGATGTTGAAATTTCTGTGTTTTTCCCCCTGATGTAA 1470 0.4122 MCGILAVLGCVDNSQAKRARIIELSRRLRHRGPDWSGIHCHEDCYLAHQRLAIVDPTSGDQPLYNEEKTVFVTVNGEIYNHKQLRQKLDSHQFRTGSDCEVIAHLYEEYGEEFVDMLDGMFSFVLIDTRDKSFIAARDAIGITPLYLGFGHDGSTWFASEMKALIDDCERFISFPPGYIYSSKQGGLRRWYNPPWYSEHIPSTPYDPIILREAFERAVFKRMMTDVPFGVLLSGGLDSSLVAAVANRYLAKSEAARQWGSQLHTFCIGLKGSPDLRAAKEVADYLGTRHYELNFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKALGVKMVLSGEGSDEIFGGYLYFHKAPNKEEFHEETCRKIKALHLYDCLRANKSTSAWGVEARVPFLDKDFINIAMSMDPEWKMIKPDLGRIEKWVLRNAFDDDKNPYLPKHILYRQKEQFSDGVGYSWIDGLKDHANKQVGSLTCDVEISVFFPLM. 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01917 489 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 185 IPR017932 -
Seca6g01917 489 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 192 IPR029055 -
Seca6g01917 489 PIRSF Asn_synthetase_glu-h 1 362 IPR006426 GO:0004066|GO:0006529
Seca6g01917 489 PIRSF Asn_synthetase_glu-h 356 481 IPR006426 GO:0004066|GO:0006529
Seca6g01917 489 Gene3D HUPs 195 481 IPR014729 -
Seca6g01917 489 CDD Asn_Synthase_B_C 211 456 IPR001962 GO:0004066|GO:0006529
Seca6g01917 489 PANTHER ASPARAGINE SYNTHETASE 1 474 - -
Seca6g01917 489 FunFam Asparagine synthetase [glutamine-hydrolyzing] 195 487 - -
Seca6g01917 489 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 201 470 - -
Seca6g01917 489 Pfam Asparagine synthase 210 361 IPR001962 GO:0004066|GO:0006529
Seca6g01917 489 FunFam Asparagine synthetase [glutamine-hydrolyzing] 2 192 - -
Seca6g01917 489 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 1 195 IPR029055 -
Seca6g01917 489 CDD AsnB 2 192 IPR033738 -
Seca6g01917 489 Pfam Glutamine amidotransferase domain 48 165 IPR017932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01917 Seca-Chr6 77110564 77116334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01917 69 259 PRT Gene Family AT2G16570 31.776 9.29e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01917 K01953 - gmx:732660 922.924