Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01798 ATGGCCGGTCTGTTACCTTGCGCGCCGAATATAGTCTCTGCTCCGTTCGGGAACTGGAGCAGCAAGAGCCATCTCCTGCACCGACCTAACTCCCACTCTTTCTCCGGTTCGACCAGGCACTTTCTTCGCGGTTCGCTTACCGTTGCCCGGTTCGGATTCAAGCCCGGTTTCTTGCCCGAGCCGAATGGCGCCGAAGCCGTCATCAGCGAACTGTTTAACCGAGCGGAGGGTCTTCTTTACAGGATTGCCGATGCCGCCGTTTCTTCTTCCGACACGGTGGCCACCACCACAGCCAAACAGAACAACGATTGGCTTTCTGGAATCACCAATTACATGGAGACTGTTCTCAAGGTACTCAAGGACGGGCTTTCTACTTTGCATGTGCCTTATGCTTATGGTTTTGCAATTATACTGCTCACGGTTCTCGTAAAAGCTGCCACATTTCCATTGACAAAAAAACAGGTAGAATCTGCCTTGGCTATGCGATCTTTGCAACCTCAAATAAAGGCTATCCAGCAACGCTATGCTGGTGATCAGGAGAGAATTCAACTTGAAACTGCTCGGTTGTATAAATTAGCCAACATCAATCCTCTAGCAGGATGCCTACCTACACTTGCAACAATACCAGTGTGGATTGGGCTATATCGAGCCCTTTCAAATGTAGCAGATGAAGGGCTCCTTACTGAAGGCTTCTTCTGGATACCTTCTCTTGCTGGTCCAACTACAATTGCAGCTCGTCAAAATGGCAGTGGTATCTCTTGGCTTTTTCCTTTTGTGGATGGTCAGCCTCCCCTTGGATGGTCAGATACATTTGCATACCTTGTCTTACCTATTTTGCTGGTTGTCTCTCAGTACATCTCTGTCCAAATAATGCAGTCATCACAGGCTAATGATCCCAACATGAAGAGTTCTCAAGCCTTAACCAAGTTCCTTCCATTAATGATTGGTTACTTTGCTCTTTCAGTTCCTTCTGGTCTTAGCCTTTACTGGTTAACAAATAATATATTGAGCACTGCACAACAAGTATGGCTTCAAAAGTTAGGAGGTGCAAAAAATCCTGCGAGGCAAGTTCAAGATGATAACATGAAAGATGATCTAATACAGATTCAGAAGTCAGTACCTAAAATAAATTCCACAAAAGCGGAAGAAACCAGACAAGGTGAGAAGACATCAGAGGGACCACAACCTGGTGAAGATTTAGGCAAATAA 1209 0.4599 MAGLLPCAPNIVSAPFGNWSSKSHLLHRPNSHSFSGSTRHFLRGSLTVARFGFKPGFLPEPNGAEAVISELFNRAEGLLYRIADAAVSSSDTVATTTAKQNNDWLSGITNYMETVLKVLKDGLSTLHVPYAYGFAIILLTVLVKAATFPLTKKQVESALAMRSLQPQIKAIQQRYAGDQERIQLETARLYKLANINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGQPPLGWSDTFAYLVLPILLVVSQYISVQIMQSSQANDPNMKSSQALTKFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPARQVQDDNMKDDLIQIQKSVPKINSTKAEETRQGEKTSEGPQPGEDLGK. 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01798 402 PANTHER OXA1 87 368 IPR001708 GO:0016020|GO:0032977
Seca6g01798 402 CDD 5TM_YidC_Alb3 133 346 IPR047196 -
Seca6g01798 402 Pfam 60Kd inner membrane protein 132 346 IPR028055 -
Seca6g01798 402 MobiDBLite consensus disorder prediction 368 402 - -
Seca6g01798 402 NCBIfam membrane protein insertase YidC 132 346 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01798 Seca-Chr6 74176799 74186688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01798 68 385 Chloroplast and Mitochondria Gene Families AT2G28800 58.282 1.70e-127 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01798 K03217 - gmx:100802546 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01798 6 74176799 74186688 Seca6g01798 6 74176799 74186688 ECH