Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01794 ATGGCTGAGGAGGTCAACCACCATCACACTTTGAAGGTGTTAGAGAATTGTCAAATTAGTCCTCCACCAGCTTCAGTCCCATCATCCTCCTTACCTTTAAGCCACCTTGACTTCCCTTTCTTTTACTGTGCCCCAGTGAAGCAAATTTTCTTCTATGATTTCCCTCATCCAACACAGCACTTCCTTCAAACTGTGCTTCCCACTCTCAAACACTCTCTTTCACTCACTCTCCAACACTTCTTCCCTTTCGCTGCTAATCTCGTCTTCCCTCCAGATCCAAACCTTCCTCACATACTCTACTCCGAAGGTGACTCTGTTTCCTTCTCTGTTTCAGAATCCACTACACATCACTTCACCCACCTCTTGTCTAACACCCCAAGAGAAATTACTCATGAACAACCTTTTATTCCCTCACTTCCTTCACCACGCACGTTAAAAGATGGCACCTTGTTGTTCCCAACCATGGCCATTCAGGTCACAGTTTTCCCTAACTCTGGTTTCACCATCTGCATCTCGTTTAGGCATGAGGTTGCAGATGCATACTCATTTCATCATTTCATGAAATTTTGGGCCTTTATATCAAAAAAAGGAGACCCACCTTCTGAGATTCCACTGCCATTGCACAATAGGGAAATGATTAAAGACACAAAAGGACTTAAGCCTGTTTTGTTGGAGAATTTGAGGAATTTCCCACCCAAGAACCCTAACGAGTATAAAACTCCTCATAGTGACTTGGTGCGTCATAGATTCACGCTGAGCCGTAACCAAGTTGAAAAACTAAAGAAATGGGTGGCTATTAAAGCTCAAAGTATGGGTCTTGAGAGTGAGACATTGCACTTATCAACCTTTGCAGTGACGTGTTCTCTGTTTTGGGTTTGTAAGGTAAAAACAGAGTCAGAAAAAGAAGACAACAACAATAACAACAATTACTACTGCTTTTCTTTTCCTGTAGATTGGCGAAACCGTTCTGGGGATTCAATTCCATCCAACTACTTTGGAAATTGCTTGACCAGTTGCTATGCGGTACTTCCAAAGAGCAAGCTTGTGGGAGAAAATGGCATTTGTGAGGCAATGAATGCTATTGGAAGCAAAATTAGAGGTCTCAAGAGTGAAGCTTTTAAAGGGGTTGAATTGTTTGAGTCATCTCATAAATTTTCGCACTCGGGGGAAAAGGATTGGTCGCATTTGGTACAAGTTGTAGGCTCACCAAAGCACAATGTGTATGGGACTGACTTTGGGTGGGGAAAGCCCAAATTGGGTGAAATGCTTCATGCTGATAATTCAACAACCATGTGCCCTTCTGATTGTAGGGACCAAGATTCCGCCATTGAAGTTGAGCTGGTACAAAAACCACTTCAAATGAAAAAATTCAGTGCCATCTGGGAACAACAACTTGGAGATATTATTGCGGTTTCTTGA 1419 0.4257 MAEEVNHHHTLKVLENCQISPPPASVPSSSLPLSHLDFPFFYCAPVKQIFFYDFPHPTQHFLQTVLPTLKHSLSLTLQHFFPFAANLVFPPDPNLPHILYSEGDSVSFSVSESTTHHFTHLLSNTPREITHEQPFIPSLPSPRTLKDGTLLFPTMAIQVTVFPNSGFTICISFRHEVADAYSFHHFMKFWAFISKKGDPPSEIPLPLHNREMIKDTKGLKPVLLENLRNFPPKNPNEYKTPHSDLVRHRFTLSRNQVEKLKKWVAIKAQSMGLESETLHLSTFAVTCSLFWVCKVKTESEKEDNNNNNNYYCFSFPVDWRNRSGDSIPSNYFGNCLTSCYAVLPKSKLVGENGICEAMNAIGSKIRGLKSEAFKGVELFESSHKFSHSGEKDWSHLVQVVGSPKHNVYGTDFGWGKPKLGEMLHADNSTTMCPSDCRDQDSAIEVELVQKPLQMKKFSAIWEQQLGDIIAVS. 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01794 472 Pfam Transferase family 23 459 - -
Seca6g01794 472 Gene3D - 10 235 IPR023213 -
Seca6g01794 472 Gene3D - 242 467 IPR023213 -
Seca6g01794 472 PANTHER - 11 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01794 Seca-Chr6 74103676 74105094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01794 68 417 Monolignol Biosynthesis Gene Families AT5G48930 21.716 8.23e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01794 - - gmx:100782335 464.536