Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01783 ATGCAGCATCTTTGGATCTATGACAGGTTCATACAGAATAACTCATTTACTGGGGAAATACCAGCAGGATTAGTATCTGGAAAAATCATTTTCAACTGTGATGATAATCCTGGACTGCATAGAGGGAACAAAAAGCATTTTCAGTTGATGCTAGGGATTTCCATTGGAGTACTAGTGATTCTATTAATATTGTTCTTAGCAAGTTTAGTGCTATTGTGTAATCTGCGGAGAAAGGCATCTCAACAGAAACATGATGAAAAAGGTATATCAGGACGCAGCACTAAACCTTTAACTGGATATTCATTTGGTCCGGGTGGGAGTTTGATGGATGAAGGTACTGCATACTATATTACACTCTCAGAATTGAAAGAAGCTACTAATAATTTTTCAAAGAAAATTGGCAAAGGAAGTTTTGGATCTGTGTATTATGGGAAAATGAGAGATGGAAAAGAGGTGGCAGTTAAGACTATGACTGATCCATCCAGCCATGGGAATCAGCAATTTGTAAATGAGGTAGCCCTCCTTTCAAGAATTCATCACAGAAACTTGGTTCCTCTAATTGGATATTGTGAAGAAGAATATCAACATATTTTGGTTTATGAGTACATGCACAATGGCACTTTACGGGATCACATTCATGGTCACATTCAAGCAATTAAATTTGCTAGGAATATACCTCTTGAAATTTTGTTGAAGACTTCATCATGCCAATCCCACTTACAAATCTTGCATGTTTTGCAGGCAAGATCCTTAATTCGGAAAGGAGATGTGATAAGCATCATGGATCCATCCCTAGTTGGGAATGTCAAAACTGAGTCAATTTGGAGGGTTGCTGAAATTGCCATGCAATGTGTAGAACAACATGGTGTCTCTAGGCCAAGGATGCAAGAAGTCATCTTGGCTATACAAGATGCTTCTAAGATTGAAAAAGGAATAGAAAACCAGCTAAAGTTGTCATCTTCAGGTAGTTCAAAACCATATTCCTCAAGGAAAACTTTACTTACAAGCTTTCTTGAAATTGAGAGCCCTGACTTGTCAAATGGTTGCCTTCCATCAGCAAGATAA 1065 0.3784 MQHLWIYDRFIQNNSFTGEIPAGLVSGKIIFNCDDNPGLHRGNKKHFQLMLGISIGVLVILLILFLASLVLLCNLRRKASQQKHDEKGISGRSTKPLTGYSFGPGGSLMDEGTAYYITLSELKEATNNFSKKIGKGSFGSVYYGKMRDGKEVAVKTMTDPSSHGNQQFVNEVALLSRIHHRNLVPLIGYCEEEYQHILVYEYMHNGTLRDHIHGHIQAIKFARNIPLEILLKTSSCQSHLQILHVLQARSLIRKGDVISIMDPSLVGNVKTESIWRVAEIAMQCVEQHGVSRPRMQEVILAIQDASKIEKGIENQLKLSSSGSSKPYSSRKTLLTSFLEIESPDLSNGCLPSAR. 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01783 354 ProSitePatterns Protein kinases ATP-binding region signature. 133 155 IPR017441 GO:0005524
Seca6g01783 354 ProSiteProfiles Protein kinase domain profile. 127 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g01783 354 SUPERFAMILY Protein kinase-like (PK-like) 110 230 IPR011009 -
Seca6g01783 354 Pfam Protein tyrosine and serine/threonine kinase 129 270 IPR001245 GO:0004672|GO:0006468
Seca6g01783 354 Gene3D Transferase(Phosphotransferase) domain 1 225 324 - -
Seca6g01783 354 MobiDBLite consensus disorder prediction 83 104 - -
Seca6g01783 354 Gene3D Phosphorylase Kinase; domain 1 107 202 - -
Seca6g01783 354 FunFam receptor-like serine/threonine-protein kinase NCRK 107 202 - -
Seca6g01783 354 PANTHER OS07G0107800 PROTEIN-RELATED 239 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01783 Seca-Chr6 73853436 73855862 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01783 239 354 Receptor kinase-like Gene Family AT1G67720 68.376 3.09e-34 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Seca6g01783 PK_Tyr_Ser-Thr 5.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01783 - - aprc:113850330 345.51