Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01768 ATGAAGTTAGAATTGGCGATAACCTCCAAAGAAATCATCAAACCATCTTCTCCAACCCCTAACCATCTTCGTTACTATCAACTCTCCTTTCTCGACCAAGTCGCTCCCATTGTTTATAACCCTTTGGTTCTATTTTACTCTTCCGACGGTACCGCTCAATTCAACACAACCACCATATCCAACCAGCTAAAGAAATCTCTATCACATGTCTTAACCCATTTCTACCCACTTGCGGGAAGAATTAATAATACCAAGAGTTTCATAGAGTGCAACGATGAGGGCATTCCCTACTTAGAAGCAAAAGTGAAGTCCAAACTTGTGGACATTATTCATAAGCCAGTCCCAAGAGAACTCAACCATTTGCTTCCATTTCAACTAGATGATATCACTGACGTCCCATTTGGTGTTCAACTTAACGTCTTTGATTGTGGTGGTATTGCGATTGGTGCATGCCTTTCTCACCAAATTGCAGACGGTTTATCATTTTTCACTTTCCTCAACAAATGGGCATCTATTGCTAGTGGACAAGATGTGCTGCCATTGCCAAAACCACAATTTGTTTCAGCTAAGCACTTTCCACCTAAAAACGTATCTGTGTTATATCCTCAAGGTGACATCACGAAGCAGAACATAATATGCAAGATGTTTGTGTTTAATGCTTCCGTTATTGAAAATCTGAAGGTGAGATATGCTGATAGCCCAGACTTCAAAGACGAGAAGTTCCCCACACGTGTCGAGGCTTTATCTGCTTTCATTTGGAGTCGTTATGTGGCTGTCACTAGAGACGAATATTCTTGTCCACAGAGAAGATATGTTGTGGTTCATGCAGTGAACCTGCGTCCAAAGATGGAACCTTCACTGCCTCCAGATTCATTTGGTAACTACTTCCGATTTATTATGACTATTCCAACGTTGAACGTTGGAGAGGAGTGTTATGGGCTAGCAAAGCAGATAAGGAATGAGGTAAAGAAGATTGACAAGGAGTATGTGAGAAAACTCCCACAGGGTAATGGGCATTTGGATTTCCTTAAGGATAACTGGGATAGAGTGCTTGTGAAGGAGGAGTTAGTTTCGTTTAGTTTCACTAGTTGGTGTAGGTTTCCTGTGTATGATGCTGATTTTGGTTGGGGAAAACCAATATGGGTAGGTACTCCTGCTTTTAATTTAAGAAATTTGGTTGTGTTTGTTGACACCAAGATCGGTGGTGGCATAGAGGCGTATGTTAGCTTGAAATCAAATTTTAAAGAGGATTTAAATTTTAAAGAGGATTTAAATTTTAAAATCAACGGTGTAAAACATGCCAAATATTTAGGCCCGAAGGCCTAA 1326 0.4035 MKLELAITSKEIIKPSSPTPNHLRYYQLSFLDQVAPIVYNPLVLFYSSDGTAQFNTTTISNQLKKSLSHVLTHFYPLAGRINNTKSFIECNDEGIPYLEAKVKSKLVDIIHKPVPRELNHLLPFQLDDITDVPFGVQLNVFDCGGIAIGACLSHQIADGLSFFTFLNKWASIASGQDVLPLPKPQFVSAKHFPPKNVSVLYPQGDITKQNIICKMFVFNASVIENLKVRYADSPDFKDEKFPTRVEALSAFIWSRYVAVTRDEYSCPQRRYVVVHAVNLRPKMEPSLPPDSFGNYFRFIMTIPTLNVGEECYGLAKQIRNEVKKIDKEYVRKLPQGNGHLDFLKDNWDRVLVKEELVSFSFTSWCRFPVYDADFGWGKPIWVGTPAFNLRNLVVFVDTKIGGGIEAYVSLKSNFKEDLNFKEDLNFKINGVKHAKYLGPKA. 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01768 441 Pfam Transferase family 5 412 - -
Seca6g01768 441 PANTHER F21J9.9 7 412 - -
Seca6g01768 441 Gene3D - 208 425 IPR023213 -
Seca6g01768 441 Gene3D - 2 199 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01768 Seca-Chr6 73558778 73560103 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01768 3 428 Monolignol Biosynthesis Gene Families AT5G48930 26.477 3.93e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01768 K13065 - gmx:102670206 581.637