Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01766 ATGAAGTTAGAATTGGCGATAACCTCCAAAGAAATCATCAAACCATCTTCTCCAACCCCTAACCATCTTCGTTACTATCAACTCTCCTTTCTCGACCAAGTCGCTCCCATTGTTTATAACCCTTTGGTTCTATTTTACTCTTCCGACGGTACCGCTCAATTCAACACAACCACCATATCCAACCAGCTAAAGAAATCTCTATCACATGTCTTAACCCATTTCTACCCACTTGCGGGAAGAATTAATAATACCAAGAGTTTCATAGAGTGCAACGATGAGGGCATTCCCTACTTAGAAGCAAAAGTGAAGTCCAAACTTGTGGACATTATTCATAAGCCAGTCCCAAGAGAACTCAACCATTTGCTTCCATTTCAACTAGATGATATCACTGACGTCCCATTTGGTGTTCAACTTAACGTCTTTGATTGTGGTGGTATTGCGATTGGTGCATGCCTTTCTCACCAAATTGCAGACGGTTTATCATTTTTCACTTTCCTCAACAAATGGGCATCTATTGCTAGTGGACAAGATGTGCTGCCATTGCCAAAACCACAATTTGTTTCAGCTAAGCACTTTCCACCTAAAAACGTATCTGTGTTATATCCTCAAGGTGACATCACGAAGCAGAACATAATATGCAAGATGTTTGTGTTTAATGCTTCCGTTATTGAAAATCTGAAGGTGAGATATGCTGATAGCCCAGACTTCAAAGACGAGAAATTCCCCACACGTGTCGAGGCTTTATCTGCTTTCATTTGGAGTCGTTATGTGGCTGTCACTAGAGACGAATATTCTTGTCCACAGAGAAGATATGTTGTGGTTCATGCAGTGAACCTGCGTCCAAAGATGGAACCTTCACTGCCTCCAGATTCATTTGGTAACTACTTCCGATTTATTATGACTATTCCAACGTTGAACGTTGGAGAGGAGTGTTATGGGCTAGCAAAGCAGATAAGGAATGAGGTAAAGAAGATTGACAAGGAGTATGTGAGAAAACTCCCACAGGGTAATGGGCATTTGGATTTCCTTAAGGATAACTGGGATAGAGTGCTTGTGAAGGAGGAGTTAGTTTCGTTTAGTTTCACTAGTTGGTGTAGGTTTCCTGTGTATGATGCTGATTTTGGTTGGGGAAAACCAATATGGGTAGGTACTCCTGCTTTTAATTTAAGAAATTTGGTTGTGTTTGTTGACACCAAGATCGGTGGTGGCATAGAGGCGTATGTTAGCTTGAAGGTGGAAGACATGGCAAAGTTTGAAGCAGATGAGGAGTTTCTTGCATGTGTGAATAAAGAACGGACTTATTGA 1305 0.4123 MKLELAITSKEIIKPSSPTPNHLRYYQLSFLDQVAPIVYNPLVLFYSSDGTAQFNTTTISNQLKKSLSHVLTHFYPLAGRINNTKSFIECNDEGIPYLEAKVKSKLVDIIHKPVPRELNHLLPFQLDDITDVPFGVQLNVFDCGGIAIGACLSHQIADGLSFFTFLNKWASIASGQDVLPLPKPQFVSAKHFPPKNVSVLYPQGDITKQNIICKMFVFNASVIENLKVRYADSPDFKDEKFPTRVEALSAFIWSRYVAVTRDEYSCPQRRYVVVHAVNLRPKMEPSLPPDSFGNYFRFIMTIPTLNVGEECYGLAKQIRNEVKKIDKEYVRKLPQGNGHLDFLKDNWDRVLVKEELVSFSFTSWCRFPVYDADFGWGKPIWVGTPAFNLRNLVVFVDTKIGGGIEAYVSLKVEDMAKFEADEEFLACVNKERTY. 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01766 434 Gene3D - 208 427 IPR023213 -
Seca6g01766 434 Pfam Transferase family 5 424 - -
Seca6g01766 434 Gene3D - 2 199 IPR023213 -
Seca6g01766 434 PANTHER F21J9.9 7 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01766 Seca-Chr6 73483971 73485275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01766 3 419 Monolignol Biosynthesis Gene Families AT5G48930 26.786 8.53e-37 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01766 K13065 - gmx:102670206 615.15