Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01757 ATGGAAGTAGAATCTGAAAGAAGAGGTGGTTGTGTGATATCTCATACTCCTGGAGCTGGAAAAACCTTTCTTGTTATTGCCTTTCTTGTCATGGGGTATACTTCATTTTTATCACTAACGAGAGAGAATTCAAAGTATGAACACAAGAAGTATATGGCTAAAGCTTTGAGGGAAAGCACTGGGATCCTTATACTCGATGAAGGGCACAATCCTAGAAGCACCAAGTCAATGTTGAGGAAAGGGTTGATGAAAGTAGAGACAGAACTGAGAATATTACTTTCTGGTACATTGTTTCAGAATAATTTTGGTGAATACTTCAACACACTTTGCTTGGCAAGGCCAAAGTTTGTTCAAGAAGTGCTGAAAGAATTAGATATAAAACAAAAGAAGGGAAATGATAAAAATCCAGAGAAAGCACAACATTTACTTGAGACACGTGCTAGGAAATTCTTCCTAGATGACATTGCTAACAAAATTAACTCAAGTGATGATGAAGTGAGGATGCAGGGTTTGAACATGTTGAGGAAAATCACAAGTGGTTTTATAGATGTTTATGAGAGTGGGAATTCTGACAAGCTTCCTGGTTTGCAAATTTATACTCTGCTTATGAACCTAACTGATGTGCAGAATGAGCTTTTGCAGAAACTGCAAAAGAAAATGGTTGGGTCTAGCGTGTTCCCTTTGGAGGGAGAGCTTATGGTAACCCTTGGATCAATACATCCATGGTTGATCAAAATAGCAACAAGTGCGGATAAGTTTTACACTTCATAG 771 0.38 MEVESERRGGCVISHTPGAGKTFLVIAFLVMGYTSFLSLTRENSKYEHKKYMAKALRESTGILILDEGHNPRSTKSMLRKGLMKVETELRILLSGTLFQNNFGEYFNTLCLARPKFVQEVLKELDIKQKKGNDKNPEKAQHLLETRARKFFLDDIANKINSSDDEVRMQGLNMLRKITSGFIDVYESGNSDKLPGLQIYTLLMNLTDVQNELLQKLQKKMVGSSVFPLEGELMVTLGSIHPWLIKIATSADKFYTS. 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01757 256 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 4 29 IPR044567 GO:0080188
Seca6g01757 256 Pfam SNF2-related domain 36 219 IPR000330 GO:0005524|GO:0140658
Seca6g01757 256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 117 IPR027417 -
Seca6g01757 256 Gene3D - 32 158 IPR038718 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01757 Seca-Chr6 72862914 72863942 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Seca6g01757 SNF2_N 4e-08 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01757 K10875 - jre:108991882 320.087