Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01726 ATGGCTGCTATCTTGCTCAGGCTTCAGTTTCATGACTGCTTTGTTGAGGTCTTTGTACATAATAATATAATATACCTTGTGTTTCTATGTCTGTTAATACATTTTTGTTCTTATTTTTTACATGGATATTGGATCCTAATTTCTTTTCAGGGATGTGATGGTTCAATTTTGATCGATAATGGTCCACAATCAGAGAAACTAGCATTTGCACATCAATGGGTTAGGGGGTTTGGAGTGATAGAAAGAGCCAAGGCACAATTGGAAGCATCTTTCCCAGGAGTGGTTTCTTGTGCAGACATAGTGGCATTGGCAGCCAGAGATGCCATAGTCATGGCAAATGGACCAGGATACCAAGTTCCAACAGGGAGGAGAGAAGGGTTGGTTTCTAATCTTTCACTTGCAACTGATATGGCAGATGTTGATGATTCAATTCAGCTACTCAAGGACAAGTTTATGAAAAAGGGTCTCACAGAGAAGGACCTTGTCCTTCTCAGTGGTACACACTCAAGGACAAGATTCATCAAGGGAACTTCACTGCTTAAACTTAGATAG 552 0.404 MAAILLRLQFHDCFVEVFVHNNIIYLVFLCLLIHFCSYFLHGYWILISFQGCDGSILIDNGPQSEKLAFAHQWVRGFGVIERAKAQLEASFPGVVSCADIVALAARDAIVMANGPGYQVPTGRREGLVSNLSLATDMADVDDSIQLLKDKFMKKGLTEKDLVLLSGTHSRTRFIKGTSLLKLR. 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01726 183 ProSitePatterns Peroxidases active site signature. 2 13 IPR019794 GO:0004601
Seca6g01726 183 Pfam Peroxidase 1 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g01726 183 Gene3D Peroxidase, domain 2 138 169 - -
Seca6g01726 183 PANTHER PEROXIDASE 25-RELATED 2 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g01726 183 Gene3D - 1 137 - -
Seca6g01726 183 PRINTS Plant peroxidase signature 75 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g01726 183 PRINTS Plant peroxidase signature 159 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g01726 183 PRINTS Plant peroxidase signature 38 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g01726 183 PRINTS Plant peroxidase signature 94 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g01726 183 PRINTS Plant peroxidase signature 113 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g01726 183 SUPERFAMILY Heme-dependent peroxidases 1 169 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca6g01726 183 ProSiteProfiles Plant heme peroxidase family profile. 1 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01726 Seca-Chr6 71863542 71864257 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01726 1 168 Peroxidase AT4G25980 56.548 1.34e-59 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01726 K00430 - gmx:547549 203.756