Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01716 ATGGTGCCCTTTGTTTTGCCTCTTCTATTCTTCTCATTCTTAGTGGGGAATTCTAAAGAACAGCTCCAAGTGGGTTTTTATTCCAACACATGTCCTCAAGCAGAGCCCACTGTTCATGTTGTTGTTAGAGACGTTGTTCTCTCTGACCCCAACATGGCTGCTATCTTGCTCAGGCTTCACTTTCATGACTGCTTTGTTGAGGGATGTGATGGTTCAATTCTGATCGACAATGGTCCACAATCAGAGAAACTAGAATTTGCACATCAATGGGTTAGGGGGTTTGGAGTGATAGAAAGAGCCAAGGCACAATTGGAAGCATCTTGCCCGGGAGTGGTTTCTTGTGCAGACATAGTGGCATTGGCAGCCAGAGATGTCATAGTCATGGTCTTAACTCTTAACTTACTTGATTAG 411 0.4428 MVPFVLPLLFFSFLVGNSKEQLQVGFYSNTCPQAEPTVHVVVRDVVLSDPNMAAILLRLHFHDCFVEGCDGSILIDNGPQSEKLEFAHQWVRGFGVIERAKAQLEASCPGVVSCADIVALAARDVIVMVLTLNLLD. 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01716 136 Gene3D - 21 133 - -
Seca6g01716 136 Pfam Peroxidase 41 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g01716 136 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Seca6g01716 136 ProSiteProfiles Plant heme peroxidase family profile. 21 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g01716 136 PANTHER PEROXIDASE 25-RELATED 11 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g01716 136 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g01716 136 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g01716 136 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g01716 136 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g01716 136 SUPERFAMILY Heme-dependent peroxidases 21 128 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca6g01716 136 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g01716 136 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01716 Seca-Chr6 71825766 71826794 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01716 6 126 Peroxidase AT4G25980 66.116 2.34e-52 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01716 K00430 - gmx:547549 200.675