Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01687 ATGATTTTAACACTTGTTTGTGGCACAACATTCCAAACCACCCTCTCTTCTTACTCTTGGTCACTCGTTACTCTCTTTCTGTCCACCTTCCTCGCTCTTTTAGCTATCTCCCTTAACTACTGGTTCACCCCGGGAGGCTTTGCATGGAGGAATTATCACAAAGAACAAACTAAAAAACTCCCTGGGCCCATGGGCTGGCCCATATTAGGGACTCTGCCTGAGATGGGCTCTCTGGCCCATCGAAAACTCGCTGCCATGGCCACCTCACTAAACTCAAAAAGGCTTATGTGTTTGAGCCTTGGAACCAACCGTGTTGTGATTAGTAGCCACCCTGAGACTGCGAGGGAAATTCTATGCGGGTCATCCTTCTCGGACAGGCCCGTTAAAGAATCCGCACGTGTCTTAATGTTCGAGCGTGCCATTGGTTTTGCTCCATATGGGACCTATTGGCGCCATCTTCGTAAGGTGGCTACAACTCACATGTTCTCTCCGAGGAGTATCTCGGGTTTGGAGAGTCTTCGGAAACGTGTGGGTTGTGAAATGGTGATGAAGACGAAGAAAGAGATGGAGGAAAAAGGTGTGGTGGAGGTTCGGGGAATATTGAATGAAGGGTCTCTTAGCAATGTTTTGGAGAGTGTGTTTGGGACTACTAATAATAGTGGTATGAGGTCAGAAACAAAGGAGGTGTTGGGTGATATGGTTAAGGAAGGGTATGAGTTAATTGCTGAGTTTAATTGGGGAGACTATTTTCCATTTAAATTTTTGGACTTTCATGGGGTTAAAAGAAGGTGTCACAAATTGGCGGCAAAAGTCAACACTGTTGTGGGTCAAATTGTGGAAGAAAGGAAAAGATCTGGGGAGTTTGTTGGACAAAATGATTTTCTTAGCGCTTTGTTGTCGTTGCCTGAAGAAGAAAGGTTAGGTGATTCAGATGTAGTGGCTATTTTGTGGGAAATGATATTTCGGGGAACAGACACGGTTGCTATACTCCTCGAATGGATTATGGCCATGATGGTGATACACCAAGACGTACAAACGAAAGCCCGCCAAGAGATTGACACGTGCGTTGGCCAAAACGGTCACGTGCGAGACTCGGACATTCAAAATCTCCCTTACCTCCAAGCCATAGTCAAGGAGGTTCTGCGATTGCACCCACCAGGCCCGTTGCTGTCGTGGGCTCGTCTTGCAATCCATGATGTCCACGTGGACAAGGTCCTTGTGCCAGCTGGTACGACTGCAATGGTTAACATGTGGGCCATAACACATGACTCGTCTGTTTGGGAGGACCCATGGGCCTTTAAGCCCGAGCGGTTCATGAAGGAAGATGTGTCTATCATGGGTTCAGACATGAGACTGGCACCGTTCGGTGCAGGACGTAGGGTGTGCCCGGGTAAAGCAATGGGCTTAGCCACGGTTCATCTCTGGCTTGCACAGCTTCTGCACCATTTCATATGGGTTCCGGTGCAGCCTGTGGATCTTTCAGAATGCCTCAAGCTCTCCCTTGAAATGAAAAAACCTTTAAGATGCCAAGCGATTTGCAGGAAAAACCTTGTAAGCTCTTGA 1563 0.4766 MILTLVCGTTFQTTLSSYSWSLVTLFLSTFLALLAISLNYWFTPGGFAWRNYHKEQTKKLPGPMGWPILGTLPEMGSLAHRKLAAMATSLNSKRLMCLSLGTNRVVISSHPETAREILCGSSFSDRPVKESARVLMFERAIGFAPYGTYWRHLRKVATTHMFSPRSISGLESLRKRVGCEMVMKTKKEMEEKGVVEVRGILNEGSLSNVLESVFGTTNNSGMRSETKEVLGDMVKEGYELIAEFNWGDYFPFKFLDFHGVKRRCHKLAAKVNTVVGQIVEERKRSGEFVGQNDFLSALLSLPEEERLGDSDVVAILWEMIFRGTDTVAILLEWIMAMMVIHQDVQTKARQEIDTCVGQNGHVRDSDIQNLPYLQAIVKEVLRLHPPGPLLSWARLAIHDVHVDKVLVPAGTTAMVNMWAITHDSSVWEDPWAFKPERFMKEDVSIMGSDMRLAPFGAGRRVCPGKAMGLATVHLWLAQLLHHFIWVPVQPVDLSECLKLSLEMKKPLRCQAICRKNLVSS. 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01687 520 Pfam Cytochrome P450 61 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g01687 520 Gene3D Cytochrome P450 47 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g01687 520 FunFam Cytochrome P450 78A5 52 514 - -
Seca6g01687 520 CDD CYP78 91 507 - -
Seca6g01687 520 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g01687 520 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g01687 520 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g01687 520 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g01687 520 SUPERFAMILY Cytochrome P450 61 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g01687 520 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g01687 520 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g01687 520 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g01687 520 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g01687 520 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g01687 520 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g01687 520 PANTHER CYTOCHROME P450 78A7-RELATED 19 514 - -
Seca6g01687 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01687 Seca-Chr6 71300185 71302051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01687 19 515 Cytochrome P450 AT1G13710 53.755 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01687 - - gmx:100799715 856.284