Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01680 ATGTATAAAAGGATAATAAACCTAACTGCGGATGACATCCAAGGTATGGGGTTTTGCAGTGAAGAGCATGCATGTAAATTTTATGATTCATATGCTAGGTGTCATGGCTTTGTTGCAAGAAAAGATGATATAAAACGTGATGTGAAAGGCAATTCTATAATGCGTCAATTGGTTTGCAACATAGAGGGTGTGAGAAATAAAAAAACTTTATAA 213 0.3427 MYKRIINLTADDIQGMGFCSEEHACKFYDSYARCHGFVARKDDIKRDVKGNSIMRQLVCNIEGVRNKKTL. 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01680 70 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 11 68 - -
Seca6g01680 70 Pfam FAR1 DNA-binding domain 26 68 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01680 Seca-Chr6 71062806 71063018 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca6g01680 FAR1 2.2e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01680 - - lja:Lj4g3v0119630.1 79.7221