Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01624 ATGGAAGTAGAATATGAAAGAAGAGGTGGTTGTGTGATATCTCATACTCCTGGAGCTGGAAAAACCTTTCTTGTTATTGCCTTTCTTGTCATGGGGTATACTTCATTTTTATCACTAACGAGAGAGAATTCAAAGTATGAACACAAGAAGTATATGGCTAAAGCTTTGAGCGAAAGCACTGGGATCCTGATACTCGATGAAGGGCATAATCCTAGAAGCACCAAGTCAAGGTTGAGGAAAGCGTTAATGAAAGTAGAGACAGAACTGGGAATATTACTTTCTGGTACATTGTTTCAGAATAATTTTGGTGAATACTTCAACACACTTTGCTTGGCAAGGCCAAAGTTTGTTCGAGAAATGCTGAAAGAATTAGATACAAAACAAAAGAAGGGAAATGATAAAAATCCAGAGAAAGCACAACATTTACTTGAGACACGTGCTAGGAAATTCTTCCTAGATGACATTGCTAAAAAAATTGACTCAAGTGACGGTGAAGTGAGGATGCAGGGTTTGAACATGTTGAGGAAAATCACAAGTGGTTTTATAGATGTTTATGAGAGTGGGAATTCTGAAAAGCTTCTTGGTTTGCAAATTTATACTCTGCTTATGAACCTAACTGATGTTCAGAATGAGCTTTTGCATAAACTGCAAAAGAAAATGGTTGGGTCCAGCGTGTTCCCTTTGGAGGGAGAGCTTATGGTAACCCTTGGATCAATACATCCATGGTTGATCAAAACAGCAACAAGTGCGGATAAGTTTTACACTTCACAGGAACTAGACGAGCTAGAGAAGTTCAAGTCTGATTTCAGCTTAGGGTCAAAAGTGAGATTTATTTTGAACCTTATCTTTCGTGTTGCCAAGGAGGAGAAGGTTCTTATCTTTTGTCGTAACCTTGCACCTATGAAGCTTTTAGTACAGTTGTTTGAGGAGTGCTTAAAATGGAAAAAGGGTAGAGAAATTTTGTTACTTTATGGGAACAAGACCTGTTTGAAAGAGGGAAAGTGA 1005 0.3821 MEVEYERRGGCVISHTPGAGKTFLVIAFLVMGYTSFLSLTRENSKYEHKKYMAKALSESTGILILDEGHNPRSTKSRLRKALMKVETELGILLSGTLFQNNFGEYFNTLCLARPKFVREMLKELDTKQKKGNDKNPEKAQHLLETRARKFFLDDIAKKIDSSDGEVRMQGLNMLRKITSGFIDVYESGNSEKLLGLQIYTLLMNLTDVQNELLHKLQKKMVGSSVFPLEGELMVTLGSIHPWLIKTATSADKFYTSQELDELEKFKSDFSLGSKVRFILNLIFRVAKEEKVLIFCRNLAPMKLLVQLFEECLKWKKGREILLLYGNKTCLKEGK. 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01624 334 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 29 326 IPR044567 GO:0080188
Seca6g01624 334 Pfam SNF2-related domain 38 154 IPR000330 GO:0005524|GO:0140658
Seca6g01624 334 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 117 IPR027417 -
Seca6g01624 334 Gene3D - 33 157 IPR038718 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01624 Seca-Chr6 69326374 69327636 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Seca6g01624 SNF2_N 1e-06 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01624 K10875 - jre:108991882 410.994