Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01618 ATGTGGATTAAGATGTTGAAATCCATAGGGAAAAGCCTTAGCCTTGGACAGCACAAGAGTCATGTGGATGGTAAAAACTTGGTTGTTTTGGCACACTGCAATGATTGTGTAGAGGAAAACAAGCAATGCAATTGTGACCATATCATTGTTGAGAATACAAAGAGTACTACTGCTGCAGAAGGTGCTAATGTTGATGCAGAGCATGATGCTAACGCCAATAGTTCTTTTGCTCATGCTGTCATCAACATGGTGGGGATGCTCATAGGTTTGGGGCAACTGTCAACTCCATATGCTATTGAAAACGGAGGATGGGCATCAGCATTCTTGCTTATGGGACTTGGGGTGATATGTGCTTATAGTTCTCACGTACTTGGAAAATGCCTTGAAAAGAATCCAAAGTTAAGAAGTTACTTGGATATTGGGACTCATGCATTTGGAGCAAAAGGAAAAGTCCTAGCTGCAACATTCATCTACTTGGAAATCTTCATGGCCCTTGTTTCCTACACCATCTCATTACATGACAACTTAATCACAGTCTTTTTAGGGACACATCTGAAGCTACACTTAGCCAAGTTATCCACATCTCAACTCCTAACAGTGGTGGCAGTTTTGATTGCCCTGCCTAGCTTGTGGATCAGAGATCTTTCTTGCATATCTTTCCTTTCAACTGCTGGAATTCTCATGTCTCTTCTCATTTTCATGTCAGTAGCAGCCACTGCAATTTTTGGAGGTGTCCATGCTAATCATGACATACCACTCCTTCAGCTCCACAATATTCCATCAATATCTGGCCTTTATGTTTTTGGTTATGGAGGACACATTGTTTTCCCTGATTTATATAAATCCATGAAAGACCCCTCAAAGTTTACCAAGGTTTCTATTGTGAGTTTCGCAATAGTCACGGCACTTTATACGTCATTGGGGTTCATGGGTGCAAAAATGTTTGGAAATGATGTGAAGTCTCAGATCACTCTTAGCATGCCACCAAAGCAAATTGTAACAAAGATAGCTCTTTGGGCAACCGTGTTGACGCCAATGACCAAATATGCACTTGAATTTGCACCATTTGCAATTCAACTTGAACATAAACTTCCAAATTCCATGAGTGACAGGACAAAAATGGTAGTTAGGGGCTGTGTAGGTTCATTTTTCCTTTTGGTAATACTAACCCTTGCTCTGTCTGTGCCATATTTTGAACATGTGCTCAGCCTCACTGGTTCCTTAGTTAGTGTAACCATCTGTTTGATTTTGCCATGTGTTTTCTACATTAAGATTTTTTGGGGTCAAATACCAAAGCATTTCTTAGTGCTTAACCTCTTTCTCATCACACTTGGGTTCATTCTTGGGGTGATGGGCACAATTTCCTCCTCAGAGTTACTATTGAAAAGCTTTCAATCACATCACTCAACTTGA 1413 0.4055 MWIKMLKSIGKSLSLGQHKSHVDGKNLVVLAHCNDCVEENKQCNCDHIIVENTKSTTAAEGANVDAEHDANANSSFAHAVINMVGMLIGLGQLSTPYAIENGGWASAFLLMGLGVICAYSSHVLGKCLEKNPKLRSYLDIGTHAFGAKGKVLAATFIYLEIFMALVSYTISLHDNLITVFLGTHLKLHLAKLSTSQLLTVVAVLIALPSLWIRDLSCISFLSTAGILMSLLIFMSVAATAIFGGVHANHDIPLLQLHNIPSISGLYVFGYGGHIVFPDLYKSMKDPSKFTKVSIVSFAIVTALYTSLGFMGAKMFGNDVKSQITLSMPPKQIVTKIALWATVLTPMTKYALEFAPFAIQLEHKLPNSMSDRTKMVVRGCVGSFFLLVILTLALSVPYFEHVLSLTGSLVSVTICLILPCVFYIKIFWGQIPKHFLVLNLFLITLGFILGVMGTISSSELLLKSFQSHHST. 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01618 470 PANTHER AMINO ACID TRANSPORTER 65 453 - -
Seca6g01618 470 Pfam Transmembrane amino acid transporter protein 73 454 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01618 Seca-Chr6 69067015 69070256 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01618 33 468 Amino Acid or Auxin Permease AAAP Family AT5G16740 61.731 2.23e-177 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01618 - - lang:109342470 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01618 6 69067015 69070256 Seca6g01618 6 69067015 69070256 ECH