Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01600 ATGCTAAGAGTTCGTGTAATCCAAAGTTGGAAAGTTCCACAATTTGAGAAGCCAAATGAGTTCTCAACTATGGAGATATTGCTACTTGATGAAAAGTGTGACAAAATTCAAGGAACCATCAGCAAGCCTCTAATTGACCACTTTGAGCCAATGATAAATGAAGGGAGTGCTTATATCATTGAAAAATTTTCCGTTGCAAATAACGATAAAAACTTTCCCTCAACAAAGCATCATTACAAAATTCGTTTCATGAAGATCACAAAATTGACTGAATGTCGGGCAGACAACATTCCAATTAATCATTTTCAATTTTTTTCATTCCCTGATATTCTCAGTGGGAAGGAAGAAGACCAATTGTTTGATGTTATTGGTCATGTTGCAGAAAGATATGACATCAAAGAGACTAAATCAAAAGGCAAAATTATTATGGATGTGCTTTTGGAGGATTTGGAGAACAATAAGTTAACTTGCACGTTATGGGCTGAATATGCTGATACCATGAATGAGTTTTTGATGAAGGGGAAAACACATGGTCCTATTGTTGTTATCTTGCAACTTTGCAAGCTGAATTCATTTAATGGAAAAATTGGGATTTCAAATAGGTACAACAAAACAAAACTCACAAAACTCATGATTAATCCTGACATCAGAGATGCTATTGAATATAAAGGCAGGTATTTCAAGTCACAAGTGTCTCTTAGCCAAGTTGTAAGCTTTGGTTCTGAACCGATTACTTTGTCAGTTGGAGAAGACATACTGCAAACTAAAAGAATGACAATTTCTGACATTTTATAG 795 0.3472 MLRVRVIQSWKVPQFEKPNEFSTMEILLLDEKCDKIQGTISKPLIDHFEPMINEGSAYIIEKFSVANNDKNFPSTKHHYKIRFMKITKLTECRADNIPINHFQFFSFPDILSGKEEDQLFDVIGHVAERYDIKETKSKGKIIMDVLLEDLENNKLTCTLWAEYADTMNEFLMKGKTHGPIVVILQLCKLNSFNGKIGISNRYNKTKLTKLMINPDIRDAIEYKGRYFKSQVSLSQVVSFGSEPITLSVGEDILQTKRMTISDIL. 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01600 264 CDD RPA1_DBD_A_like 1 88 - -
Seca6g01600 264 Gene3D - 1 94 IPR012340 -
Seca6g01600 264 SUPERFAMILY Nucleic acid-binding proteins 101 228 IPR012340 -
Seca6g01600 264 Pfam Domain of unknown function DUF223 26 112 IPR003871 -
Seca6g01600 264 CDD RPA1_DBD_B_like 121 227 - -
Seca6g01600 264 Gene3D - 95 234 IPR012340 -
Seca6g01600 264 SUPERFAMILY Nucleic acid-binding proteins 2 92 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01600 Seca-Chr6 68447746 68449450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01600 2 226 Core DNA Replication Machinery Family AT5G45400 24.153 7.23e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01600 - - mtr:112422829 237.269