Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01574 ATGTTATCCGTTTCGAGCTTCCCCTCGCCGCCGGTGCCTCCGTTGCGAGCCCCAAACGACCTCAAAGCAATTGAGCTCCTCCGTCGTCATCGTTTCGGTGCAGTGGCTGCAGGGTACAGGTTGAGTTCTCGCCTCGGAGGCAGCCGAAACGCCGCGCTAGGAGGCGGCTTCGCTCTCGAAGCCACTAACGGCGCTGCCGCTTACGCTCTAAATGCATATACTCTACAAGAATGCTTGAGATTCAAAATGGCAGTGGTTGGGATTGATTGGAATGCATTTCTTCATTTTTCTATGATTTTTCCTTCTCTGTTCGGTATGCATTCCTTGTTTTTCTTAATTTTGTGTTTCGATTTTGCCTTTTTAGACGTAGTGGCCATGAAGGTGTTCAATAATAAGCAGACGACGATTTTATTTACTATGCAACTTCAATTTTACATTGAATATCTGGAGATTGATTGGTGTGCATTTCTTCATTTTTCTCTGATATTGCCTTTTCTGTTCGGAGCGTGGCTTGGCACTTATGATACAACGAAAGAGGCTGCTATGGTTTATGACAGAGTAGCTACTGATTTTAGAGGCGTTGATGCTGTTACTAATCTAATAAAACCGCATCAGAAAGAGAAATCTATTCCGAAGTGTGATGAATGTGGTGAAGTTGAATCTGTTATGTTCACATGCTATGTTAGTGTTGCTTAA 696 0.4382 MLSVSSFPSPPVPPLRAPNDLKAIELLRRHRFGAVAAGYRLSSRLGGSRNAALGGGFALEATNGAAAYALNAYTLQECLRFKMAVVGIDWNAFLHFSMIFPSLFGMHSLFFLILCFDFAFLDVVAMKVFNNKQTTILFTMQLQFYIEYLEIDWCAFLHFSLILPFLFGAWLGTYDTTKEAAMVYDRVATDFRGVDAVTNLIKPHQKEKSIPKCDECGEVESVMFTCYVSVA. 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01574 231 SUPERFAMILY DNA-binding domain 169 200 IPR016177 GO:0003677
Seca6g01574 231 Gene3D AP2/ERF domain 168 201 IPR036955 GO:0003700|GO:0006355
Seca6g01574 231 ProSiteProfiles AP2/ERF domain profile. 170 201 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01574 Seca-Chr6 67611864 67613393 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01574 170 199 AP2-EREBP Transcription Factor Family AT4G23750 66.667 1.72e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01574 - - lja:Lj0g3v0150929.1 67.3958