Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01567 ATGTCAAGAAAGCTGCGATTCTTCAAGGATCAAATCAATAAAGCTGGTCTAATGTCTTCTCGCACTGTATTGCAACCAGACATTGACTTGGAGGATTTAGAGATACAACTTGCTGAGCATGAACATGAGCTAATTGAAATGAACTCTAATAGTGACAAACTTCGGCAATCATATAATGAACTCCTGGAATTCAAGATTGTATTACAGAAGCTTATCGATGCCGGGAAAATTCATGCAGGTGTGTTCTATTTGTCTCTTCGAGAGCCCTCTGATTTTGGTGCTAGTTAA 288 0.3889 MSRKLRFFKDQINKAGLMSSRTVLQPDIDLEDLEIQLAEHEHELIEMNSNSDKLRQSYNELLEFKIVLQKLIDAGKIHAGVFYLSLREPSDFGAS. 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01567 95 PANTHER VACUOLAR PROTON ATPASES 1 71 IPR002490 GO:0033179|GO:0046961|GO:1902600
Seca6g01567 95 Coils Coil 30 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01567 Seca-Chr6 67292731 67294345 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01567 1 70 Primary Pumps ATPases(2) AT2G28520 76.056 2.58e-29 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01567 K02154 - gmx:100776037 129.413