Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01552 ATGCTTGGGGGCTTCCCACTTCAGGAAATTCACATGTCTATGACAAATGGTCCAAATATCACAACCTCAACATTGGTGATTCACTCTGTGTTTCTATACCCACCAAGTCAAGATTCAGTGATTCAAGTAACAGAGGAGTCCTACAAGAGCTGCAACCTTAAAGATCCGATCTTGTACATGAACAATGGGAATTCATTGTTCAACATTACATCAGAGGGGGATTTCTACTTCACTAGTGGTGAAGCTGGCCATTGTCAAAAGAATCAGAAGCTTCATATATTAGTAGGTAATGGCACGGGAAATGTGAATAATGCATATGCTCCTACTTCATTGCCTGCATACGCACCCTCCTATCCCACTGTATTTGGTACCATTCCAGTTTCTCCTTCTTCCTCACCTCAGTTATATTCAAATTTTCCACTGGTCATTGTGGGATTCTTGATGTGTACACTGATCTCTACCGTAATGTGA 471 0.414 MLGGFPLQEIHMSMTNGPNITTSTLVIHSVFLYPPSQDSVIQVTEESYKSCNLKDPILYMNNGNSLFNITSEGDFYFTSGEAGHCQKNQKLHILVGNGTGNVNNAYAPTSLPAYAPSYPTVFGTIPVSPSSSPQLYSNFPLVIVGFLMCTLISTVM. 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01552 156 Gene3D - 14 95 IPR008972 -
Seca6g01552 156 Pfam Plastocyanin-like domain 30 88 IPR003245 GO:0009055
Seca6g01552 156 SUPERFAMILY Cupredoxins 30 95 IPR008972 -
Seca6g01552 156 ProSiteProfiles Phytocyanin domain profile. 1 97 IPR003245 GO:0009055
Seca6g01552 156 PANTHER BLUE COPPER PROTEIN 29 108 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01552 Seca-Chr6 66672558 66673835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01552 30 127 Phytocyanin Superfamily AT1G64640 58.163 6.72e-33 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01552 - - gmx:100792701 196.052