Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01546 ATGAAGTCATGCGATAATAAATTGATCAAATTTTGTGTTTGCAAGAAGGATTTTCCAACTGAAAAGTCATTGCTTGGCCATTTGAGATCCCACCCTAAAAGGTTTTGGAGGGGTGTTCACCCTCTTGAACCATCATCTCACAACCAAAATTCTATGGAAGAGAATAATGATAAAGAAGATAATGGTGGCCAAATTTTAAGTGTAACAACGGAAGCAGCTATTGATATATCGAAGTATTTGCCACTAAGTTGGAAGAAGACCGATAAAAGAGGTCGGGCATGTACTTATAGCAAAGAGGATATTAATGCTGCCCAAATACTTATGTTCATGTCTCGAGATAATAAGAGGTCACATTTAGTGGTGAATCCTAACTTTTCTCAACATCCCAACCTCAATGAGAATGGTGATGAGTGTGATAAGAATAATGGAGAGAAGAGTATGAAGGATGAGGTAATAGGTAGTGAGTTGCATGATCAAACGGTTGCAATAATGAATATGAAGATTTATAAGAAAATCAAGTTACTGGTGAAATTGAAGAATCCAAATGAAGAATCTGAAGAGAAGATCTTGCCTGTACCAGAAGATGACAATGAAGAAGAAAGTCAAGAAGAAAGTTAA 618 0.3625 MKSCDNKLIKFCVCKKDFPTEKSLLGHLRSHPKRFWRGVHPLEPSSHNQNSMEENNDKEDNGGQILSVTTEAAIDISKYLPLSWKKTDKRGRACTYSKEDINAAQILMFMSRDNKRSHLVVNPNFSQHPNLNENGDECDKNNGEKSMKDEVIGSELHDQTVAIMNMKIYKKIKLLVKLKNPNEESEEKILPVPEDDNEEESQEES. 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01546 205 MobiDBLite consensus disorder prediction 180 205 - -
Seca6g01546 205 MobiDBLite consensus disorder prediction 38 62 - -
Seca6g01546 205 MobiDBLite consensus disorder prediction 125 145 - -
Seca6g01546 205 MobiDBLite consensus disorder prediction 189 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01546 Seca-Chr6 66581121 66581738 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01546 9 45 C2H2 Transcription Factor Family AT2G26940 51.351 3.51e-08 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Seca6g01546 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01546 - - cam:105851665 95.5153