Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01482 ATGTGCAATTTTGCTCTCAATTGCATGCAAAAAATACTTATCTCCAATAAAATTGGAAACTTACTAGAAAACTTTGTTCACAGGATTACAAGGTGGATTGATGAAGAAGAAGATAAAATTAAAGCTTCAGGGAAAACCAGTTTGCAGTATGTTATAATGGATATGACTACTGTTGGGAACATTGATACAAGTGGAATAAGCATGCTTGAAGAGTTTAAAAAGAGTATTGATGATAGAAGAGGGCTACAGGCAATTATTTTTCTCTTGTGCTAG 273 0.3333 MCNFALNCMQKILISNKIGNLLENFVHRITRWIDEEEDKIKASGKTSLQYVIMDMTTVGNIDTSGISMLEEFKKSIDDRRGLQAIIFLLC. 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01482 90 Gene3D STAS domain 9 89 IPR036513 -
Seca6g01482 90 ProSiteProfiles STAS domain profile. 23 90 IPR002645 -
Seca6g01482 90 Pfam STAS domain 23 83 IPR002645 -
Seca6g01482 90 SUPERFAMILY SpoIIaa-like 41 79 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01482 Seca-Chr6 64936795 64938097 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01482 28 86 Inorganic Solute Cotransporters AT4G02700 66.102 8.12e-21 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01482 K17471 - lang:109335678 93.9745