Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01475 ATGCAACAGCCAGACATTAGTGCTCCAGGAGCTAATATTTTAGCAGCATGGCCTCCTGAATCTCCTCCCTCAGCATCATCCAGTGATGGACGTTCTGTGAGCTGGAATTTTCAATCAGGAACCTCAATGGCATGCCCTCATGTGGCCGGTGTTGCAGCCCTTATCAAATCAGCACATCCCAATTGGTCTCCGGCTGCCATTAGGTCTGCTCTCATGACAACAGCATATACTCTAGACACAACCTTTGACAGTATTCTTGCTGGTGGATCAATGAAAGTAGCAGATCCCTTTGACATGGGTGCTGGCCACATAGACCCTTCAAAAGCAATTGATCCAGGACTAATCTATGACATAAAACCTTCTGATTACAACATTTTCCTCTGCAATATGGGCTTCACAGAAGAACAGATAAAAAAGATCACTGTTCAGACAAGCTGCAAACACTTGGTGACCAAAACCAATGCCATTCTAAACTACCCATCAATCACACTCTCAAATCACAAGTCCACAGTAACCATCAAAAGGACTGTTCGTAATGTGGGTCGAAACAAAAATGTCATATATTTTGTTAGCATCTTGGAACCCTGTGGAGTGGAGGTTGTGGTGTGGCCCAAGATTCTAATATTCTCATGGTTCAAGCAAGAAAATTCATACTATGTGACCCTAAAGCCCAAGAAGAAATCTCAAGGGAGGTATGATTTCGGAGAGATAATTTGGTCAGATGGATTCCATTATGTTAGGAGTCCTTTGGCTGTATGTGTTAATACTTCTGGTTCTGGTTTTGATGGATCCAACTACTACTCATACTAG 810 0.4284 MQQPDISAPGANILAAWPPESPPSASSSDGRSVSWNFQSGTSMACPHVAGVAALIKSAHPNWSPAAIRSALMTTAYTLDTTFDSILAGGSMKVADPFDMGAGHIDPSKAIDPGLIYDIKPSDYNIFLCNMGFTEEQIKKITVQTSCKHLVTKTNAILNYPSITLSNHKSTVTIKRTVRNVGRNKNVIYFVSILEPCGVEVVVWPKILIFSWFKQENSYYVTLKPKKKSQGRYDFGEIIWSDGFHYVRSPLAVCVNTSGSGFDGSNYYSY. 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01475 269 MobiDBLite consensus disorder prediction 1 33 - -
Seca6g01475 269 Gene3D - 127 254 - -
Seca6g01475 269 Gene3D Peptidase S8/S53 domain 3 123 IPR036852 GO:0004252|GO:0006508
Seca6g01475 269 Pfam Fibronectin type-III domain 157 252 IPR041469 -
Seca6g01475 269 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 252 IPR045051 -
Seca6g01475 269 ProSitePatterns Serine proteases, subtilase family, serine active site. 40 50 IPR023828 -
Seca6g01475 269 SUPERFAMILY Subtilisin-like 4 115 IPR036852 GO:0004252|GO:0006508
Seca6g01475 269 FunFam Subtilisin-like protease SBT1.5 127 255 - -
Seca6g01475 269 ProSiteProfiles Serine proteases, subtilase domain profile. 1 110 - -
Seca6g01475 269 Pfam Subtilase family 3 79 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01475 Seca-Chr6 64557717 64559035 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01475 3 258 Subtilisin-like Serine Gene Family AT4G26330 59.160 1.17e-105 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01475 - - qsu:112038682 392.889